Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd1Q61466 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd1Q61466 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd1Q61466 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd1Q61466 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd1Q61466 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd1Q61466 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.73■□□□□ 0.27
Smarcd1Q61466 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd1Q61466 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd1Q61466 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.72■□□□□ 0.27
Smarcd1Q61466 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd1Q61466 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd1Q61466 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd1Q61466 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.72■□□□□ 0.27
Smarcd1Q61466 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd1Q61466 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.72■□□□□ 0.27
Smarcd1Q61466 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd1Q61466 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd1Q61466 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd1Q61466 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd1Q61466 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd1Q61466 Gm4459-201ENSMUST00000118750 468 ntBASIC16.72■□□□□ 0.27
Smarcd1Q61466 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.72■□□□□ 0.27
Smarcd1Q61466 Gm44357-201ENSMUST00000195897 142 ntBASIC16.72■□□□□ 0.27
Smarcd1Q61466 Gm19658-201ENSMUST00000196231 138 ntBASIC16.72■□□□□ 0.27
Smarcd1Q61466 Gm44367-201ENSMUST00000196836 138 ntBASIC16.72■□□□□ 0.27
Smarcd1Q61466 Gm44350-201ENSMUST00000197197 138 ntBASIC16.72■□□□□ 0.27
Smarcd1Q61466 Gm44390-201ENSMUST00000197533 144 ntBASIC16.72■□□□□ 0.27
Smarcd1Q61466 Gm44313-201ENSMUST00000198018 138 ntBASIC16.72■□□□□ 0.27
Smarcd1Q61466 Gm44486-201ENSMUST00000198508 138 ntBASIC16.72■□□□□ 0.27
Smarcd1Q61466 Gm44314-201ENSMUST00000199263 138 ntBASIC16.72■□□□□ 0.27
Smarcd1Q61466 Gm44394-201ENSMUST00000199558 138 ntBASIC16.72■□□□□ 0.27
Smarcd1Q61466 Gm44484-201ENSMUST00000199873 138 ntBASIC16.72■□□□□ 0.27
Smarcd1Q61466 Gm44466-201ENSMUST00000200264 138 ntBASIC16.72■□□□□ 0.27
Smarcd1Q61466 Gm44359-201ENSMUST00000200671 138 ntBASIC16.72■□□□□ 0.27
Smarcd1Q61466 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.72■□□□□ 0.27
Smarcd1Q61466 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.72■□□□□ 0.27
Smarcd1Q61466 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.72■□□□□ 0.27
Smarcd1Q61466 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd1Q61466 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd1Q61466 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd1Q61466 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd1Q61466 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd1Q61466 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Smarcd1Q61466 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Smarcd1Q61466 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd1Q61466 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd1Q61466 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd1Q61466 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd1Q61466 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd1Q61466 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd1Q61466 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd1Q61466 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd1Q61466 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd1Q61466 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd1Q61466 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd1Q61466 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd1Q61466 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.71■□□□□ 0.27
Smarcd1Q61466 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.71■□□□□ 0.27
Smarcd1Q61466 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Smarcd1Q61466 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
Smarcd1Q61466 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd1Q61466 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd1Q61466 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Smarcd1Q61466 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.7■□□□□ 0.26
Smarcd1Q61466 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Smarcd1Q61466 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd1Q61466 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Smarcd1Q61466 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd1Q61466 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.7■□□□□ 0.26
Smarcd1Q61466 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd1Q61466 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd1Q61466 Gm11452-201ENSMUST00000122376 690 ntBASIC16.7■□□□□ 0.26
Smarcd1Q61466 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.7■□□□□ 0.26
Smarcd1Q61466 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.7■□□□□ 0.26
Smarcd1Q61466 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd1Q61466 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd1Q61466 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd1Q61466 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd1Q61466 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Smarcd1Q61466 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Smarcd1Q61466 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd1Q61466 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Smarcd1Q61466 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd1Q61466 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd1Q61466 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd1Q61466 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd1Q61466 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd1Q61466 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd1Q61466 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd1Q61466 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd1Q61466 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Smarcd1Q61466 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd1Q61466 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.69■□□□□ 0.26
Smarcd1Q61466 Gm6376-201ENSMUST00000209407 580 ntBASIC16.69■□□□□ 0.26
Smarcd1Q61466 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd1Q61466 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Smarcd1Q61466 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Smarcd1Q61466 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Smarcd1Q61466 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms