Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cln3Q61124 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cln3Q61124 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cln3Q61124 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.59■□□□□ 0.41
Cln3Q61124 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.59■□□□□ 0.41
Cln3Q61124 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cln3Q61124 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cln3Q61124 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cln3Q61124 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cln3Q61124 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.58■□□□□ 0.4
Cln3Q61124 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.58■□□□□ 0.4
Cln3Q61124 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.58■□□□□ 0.4
Cln3Q61124 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cln3Q61124 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cln3Q61124 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cln3Q61124 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cln3Q61124 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cln3Q61124 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cln3Q61124 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cln3Q61124 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cln3Q61124 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cln3Q61124 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cln3Q61124 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cln3Q61124 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cln3Q61124 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cln3Q61124 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cln3Q61124 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Cln3Q61124 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cln3Q61124 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cln3Q61124 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cln3Q61124 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cln3Q61124 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cln3Q61124 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cln3Q61124 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cln3Q61124 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cln3Q61124 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cln3Q61124 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.57■□□□□ 0.4
Cln3Q61124 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.57■□□□□ 0.4
Cln3Q61124 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.57■□□□□ 0.4
Cln3Q61124 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.57■□□□□ 0.4
Cln3Q61124 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cln3Q61124 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cln3Q61124 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cln3Q61124 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cln3Q61124 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.56■□□□□ 0.4
Cln3Q61124 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cln3Q61124 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cln3Q61124 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cln3Q61124 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
Cln3Q61124 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cln3Q61124 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cln3Q61124 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Cln3Q61124 Gm13597-201ENSMUST00000121239 375 ntBASIC17.56■□□□□ 0.4
Cln3Q61124 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cln3Q61124 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.56■□□□□ 0.4
Cln3Q61124 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.56■□□□□ 0.4
Cln3Q61124 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cln3Q61124 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cln3Q61124 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Cln3Q61124 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cln3Q61124 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cln3Q61124 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cln3Q61124 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cln3Q61124 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cln3Q61124 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cln3Q61124 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cln3Q61124 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cln3Q61124 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cln3Q61124 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cln3Q61124 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cln3Q61124 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cln3Q61124 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.55■□□□□ 0.4
Cln3Q61124 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cln3Q61124 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.55■□□□□ 0.4
Cln3Q61124 Gm17968-201ENSMUST00000194902 784 ntBASIC17.55■□□□□ 0.4
Cln3Q61124 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cln3Q61124 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cln3Q61124 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cln3Q61124 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.55■□□□□ 0.4
Cln3Q61124 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cln3Q61124 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cln3Q61124 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cln3Q61124 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cln3Q61124 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cln3Q61124 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Cln3Q61124 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cln3Q61124 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cln3Q61124 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cln3Q61124 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cln3Q61124 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Cln3Q61124 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cln3Q61124 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.54■□□□□ 0.4
Cln3Q61124 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.54■□□□□ 0.4
Cln3Q61124 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Cln3Q61124 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cln3Q61124 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cln3Q61124 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cln3Q61124 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cln3Q61124 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cln3Q61124 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms