Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm15653-201ENSMUST00000119247 907 ntBASIC15.8■□□□□ 0.12
Col12a1Q60847 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.8■□□□□ 0.12
Col12a1Q60847 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Col12a1Q60847 Gm9682-201ENSMUST00000197505 556 ntBASIC15.8■□□□□ 0.12
Col12a1Q60847 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.8■□□□□ 0.12
Col12a1Q60847 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col12a1Q60847 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.8■□□□□ 0.12
Col12a1Q60847 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col12a1Q60847 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col12a1Q60847 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col12a1Q60847 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col12a1Q60847 Gm13453-201ENSMUST00000118708 357 ntBASIC15.79■□□□□ 0.12
Col12a1Q60847 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col12a1Q60847 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col12a1Q60847 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Col12a1Q60847 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Col12a1Q60847 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Col12a1Q60847 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col12a1Q60847 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col12a1Q60847 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.79■□□□□ 0.12
Col12a1Q60847 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Col12a1Q60847 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.79■□□□□ 0.12
Col12a1Q60847 Gm14928-201ENSMUST00000120198 477 ntBASIC15.79■□□□□ 0.12
Col12a1Q60847 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.79■□□□□ 0.12
Col12a1Q60847 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Col12a1Q60847 Gm38294-201ENSMUST00000192831 381 ntBASIC15.79■□□□□ 0.12
Col12a1Q60847 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col12a1Q60847 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Col12a1Q60847 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col12a1Q60847 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col12a1Q60847 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col12a1Q60847 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col12a1Q60847 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col12a1Q60847 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col12a1Q60847 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col12a1Q60847 Gm8344-201ENSMUST00000119813 856 ntBASIC15.79■□□□□ 0.12
Col12a1Q60847 Mir7085-201ENSMUST00000184353 66 ntBASIC15.79■□□□□ 0.12
Col12a1Q60847 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.79■□□□□ 0.12
Col12a1Q60847 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col12a1Q60847 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col12a1Q60847 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col12a1Q60847 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col12a1Q60847 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.78■□□□□ 0.12
Col12a1Q60847 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col12a1Q60847 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Col12a1Q60847 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col12a1Q60847 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col12a1Q60847 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col12a1Q60847 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col12a1Q60847 Gm27989-201ENSMUST00000184721 107 ntBASIC15.78■□□□□ 0.12
Col12a1Q60847 Gm6007-201ENSMUST00000208170 823 ntBASIC15.78■□□□□ 0.12
Col12a1Q60847 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.78■□□□□ 0.12
Col12a1Q60847 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.77■□□□□ 0.12
Col12a1Q60847 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col12a1Q60847 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col12a1Q60847 Mir6420-201ENSMUST00000185032 102 ntBASIC15.77■□□□□ 0.12
Col12a1Q60847 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.77■□□□□ 0.12
Col12a1Q60847 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col12a1Q60847 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col12a1Q60847 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.77■□□□□ 0.12
Col12a1Q60847 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col12a1Q60847 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col12a1Q60847 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.77■□□□□ 0.11
Col12a1Q60847 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col12a1Q60847 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.77■□□□□ 0.11
Col12a1Q60847 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.11
Col12a1Q60847 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.77■□□□□ 0.11
Col12a1Q60847 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col12a1Q60847 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col12a1Q60847 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col12a1Q60847 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col12a1Q60847 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Col12a1Q60847 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Col12a1Q60847 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.77■□□□□ 0.11
Col12a1Q60847 Gm15358-201ENSMUST00000119249 520 ntBASIC15.77■□□□□ 0.11
Col12a1Q60847 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col12a1Q60847 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col12a1Q60847 Gm7730-201ENSMUST00000212486 454 ntBASIC15.77■□□□□ 0.11
Col12a1Q60847 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col12a1Q60847 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col12a1Q60847 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Col12a1Q60847 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.76■□□□□ 0.11
Col12a1Q60847 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col12a1Q60847 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col12a1Q60847 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col12a1Q60847 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col12a1Q60847 Gm12138-201ENSMUST00000122180 951 ntBASIC15.76■□□□□ 0.11
Col12a1Q60847 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.76■□□□□ 0.11
Col12a1Q60847 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col12a1Q60847 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.76■□□□□ 0.11
Col12a1Q60847 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col12a1Q60847 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.76■□□□□ 0.11
Col12a1Q60847 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col12a1Q60847 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col12a1Q60847 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col12a1Q60847 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col12a1Q60847 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Col12a1Q60847 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.76■□□□□ 0.11
Col12a1Q60847 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.76■□□□□ 0.11
Col12a1Q60847 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms