Protein–RNA interactions for Protein: Q5RJF7

Cacna2d4, Voltage-dependent calcium channel subunit alpha-2/delta-4, mousemouse

Predictions only

Length 1,116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna2d4Q5RJF7 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna2d4Q5RJF7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna2d4Q5RJF7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna2d4Q5RJF7 Dancr-204ENSMUST00000132389 2347 ntBASIC17.93■□□□□ 0.46
Cacna2d4Q5RJF7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna2d4Q5RJF7 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna2d4Q5RJF7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cacna2d4Q5RJF7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna2d4Q5RJF7 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna2d4Q5RJF7 Gm15794-201ENSMUST00000120182 631 ntBASIC17.93■□□□□ 0.46
Cacna2d4Q5RJF7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.93■□□□□ 0.46
Cacna2d4Q5RJF7 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna2d4Q5RJF7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna2d4Q5RJF7 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cacna2d4Q5RJF7 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cacna2d4Q5RJF7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna2d4Q5RJF7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna2d4Q5RJF7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cacna2d4Q5RJF7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna2d4Q5RJF7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna2d4Q5RJF7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna2d4Q5RJF7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna2d4Q5RJF7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna2d4Q5RJF7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna2d4Q5RJF7 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Cacna2d4Q5RJF7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna2d4Q5RJF7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna2d4Q5RJF7 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna2d4Q5RJF7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna2d4Q5RJF7 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Cacna2d4Q5RJF7 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Cacna2d4Q5RJF7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.92■□□□□ 0.46
Cacna2d4Q5RJF7 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna2d4Q5RJF7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna2d4Q5RJF7 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna2d4Q5RJF7 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna2d4Q5RJF7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna2d4Q5RJF7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna2d4Q5RJF7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna2d4Q5RJF7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna2d4Q5RJF7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna2d4Q5RJF7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna2d4Q5RJF7 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 Gm21362-201ENSMUST00000194272 928 ntBASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna2d4Q5RJF7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna2d4Q5RJF7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna2d4Q5RJF7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna2d4Q5RJF7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna2d4Q5RJF7 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna2d4Q5RJF7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna2d4Q5RJF7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Cacna2d4Q5RJF7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna2d4Q5RJF7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna2d4Q5RJF7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna2d4Q5RJF7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
Cacna2d4Q5RJF7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna2d4Q5RJF7 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna2d4Q5RJF7 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna2d4Q5RJF7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.9■□□□□ 0.46
Cacna2d4Q5RJF7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.9■□□□□ 0.46
Cacna2d4Q5RJF7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.9■□□□□ 0.46
Cacna2d4Q5RJF7 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.9■□□□□ 0.46
Cacna2d4Q5RJF7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna2d4Q5RJF7 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cacna2d4Q5RJF7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna2d4Q5RJF7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.9■□□□□ 0.46
Cacna2d4Q5RJF7 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cacna2d4Q5RJF7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cacna2d4Q5RJF7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cacna2d4Q5RJF7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna2d4Q5RJF7 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna2d4Q5RJF7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.89■□□□□ 0.45
Cacna2d4Q5RJF7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna2d4Q5RJF7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna2d4Q5RJF7 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna2d4Q5RJF7 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna2d4Q5RJF7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms