Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Gm15565-201ENSMUST00000118890 427 ntBASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Mir5130-201ENSMUST00000175160 84 ntBASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Gm45058-201ENSMUST00000205810 766 ntBASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7-2Q5R1I3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Gm6433-201ENSMUST00000118634 875 ntBASIC12□□□□□ -0.49
Trav7-2Q5R1I3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Gm7889-201ENSMUST00000185591 958 ntBASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Gm7370-201ENSMUST00000219471 767 ntBASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Gm6190-201ENSMUST00000220683 1374 ntBASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Gm16011-201ENSMUST00000121567 2662 ntBASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav7-2Q5R1I3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 Mir1668-201ENSMUST00000184114 107 ntBASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 AC153881.2-201ENSMUST00000214877 204 ntBASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 Gm8668-201ENSMUST00000120559 1447 ntBASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 Gm19430-201ENSMUST00000193847 2137 ntBASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7-2Q5R1I3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7-2Q5R1I3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7-2Q5R1I3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7-2Q5R1I3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7-2Q5R1I3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7-2Q5R1I3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7-2Q5R1I3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7-2Q5R1I3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7-2Q5R1I3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7-2Q5R1I3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7-2Q5R1I3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav7-2Q5R1I3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7-2Q5R1I3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7-2Q5R1I3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav7-2Q5R1I3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms