Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav6d-4Q5R1I0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Gm11452-201ENSMUST00000122376 690 ntBASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Mir6404-201ENSMUST00000183699 94 ntBASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Gm7506-201ENSMUST00000207758 815 ntBASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-4Q5R1I0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6d-4Q5R1I0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6d-4Q5R1I0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms