Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Gm10231-201ENSMUST00000181584 441 ntBASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Gm36967-201ENSMUST00000193814 266 ntBASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Gm10175-202ENSMUST00000208752 441 ntBASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Gm10013-201ENSMUST00000106074 672 ntBASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5d-4Q5R1F6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Trav5d-4Q5R1F6 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5d-4Q5R1F6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5d-4Q5R1F6 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5d-4Q5R1F6 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trav5d-4Q5R1F6 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5d-4Q5R1F6 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.85□□□□□ -0.19
Trav5d-4Q5R1F6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5d-4Q5R1F6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5d-4Q5R1F6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav5d-4Q5R1F6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav5d-4Q5R1F6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5d-4Q5R1F6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav5d-4Q5R1F6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav5d-4Q5R1F6 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5d-4Q5R1F6 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5d-4Q5R1F6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav5d-4Q5R1F6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.85□□□□□ -0.19
Trav5d-4Q5R1F6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5d-4Q5R1F6 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trav5d-4Q5R1F6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5d-4Q5R1F6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5d-4Q5R1F6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5d-4Q5R1F6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5d-4Q5R1F6 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Trav5d-4Q5R1F6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5d-4Q5R1F6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5d-4Q5R1F6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5d-4Q5R1F6 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5d-4Q5R1F6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5d-4Q5R1F6 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.84□□□□□ -0.19
Trav5d-4Q5R1F6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.84□□□□□ -0.19
Trav5d-4Q5R1F6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5d-4Q5R1F6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5d-4Q5R1F6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav5d-4Q5R1F6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5d-4Q5R1F6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5d-4Q5R1F6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms