Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Trim41Q5NCC3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Trim41Q5NCC3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Gm4609-201ENSMUST00000106443 1002 ntBASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Gm5138-201ENSMUST00000113842 1002 ntBASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Gm15191-201ENSMUST00000117933 1000 ntBASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Gm12182-201ENSMUST00000118655 1008 ntBASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Gm13882-201ENSMUST00000120886 1002 ntBASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Gm10284-201ENSMUST00000145057 1005 ntBASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Gm10481-201ENSMUST00000179228 1002 ntBASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Gm2574-201ENSMUST00000181051 1002 ntBASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Gm3200-201ENSMUST00000181493 1002 ntBASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Gm8825-201ENSMUST00000182565 998 ntBASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Gm4518-201ENSMUST00000182638 718 ntBASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Gm8330-201ENSMUST00000182754 1008 ntBASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Gm4575-201ENSMUST00000182991 1002 ntBASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Gm8709-201ENSMUST00000183230 1012 ntBASIC27.77■■■□□ 2.04
Trim41Q5NCC3 AC155729.1-201ENSMUST00000227758 544 ntBASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Gm10293-201ENSMUST00000076317 1002 ntBASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Gm6316-201ENSMUST00000082064 1020 ntBASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Trim41Q5NCC3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
Trim41Q5NCC3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Trim41Q5NCC3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Trim41Q5NCC3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC27.76■■■□□ 2.03
Trim41Q5NCC3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Trim41Q5NCC3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Trim41Q5NCC3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
Trim41Q5NCC3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC27.76■■■□□ 2.03
Trim41Q5NCC3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC27.76■■■□□ 2.03
Trim41Q5NCC3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC27.76■■■□□ 2.03
Trim41Q5NCC3 Mir7023-201ENSMUST00000185093 64 ntBASIC27.76■■■□□ 2.03
Trim41Q5NCC3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
Trim41Q5NCC3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Trim41Q5NCC3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
Trim41Q5NCC3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Trim41Q5NCC3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Trim41Q5NCC3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC27.76■■■□□ 2.03
Trim41Q5NCC3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Trim41Q5NCC3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC27.76■■■□□ 2.03
Trim41Q5NCC3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Trim41Q5NCC3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Trim41Q5NCC3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.03
Trim41Q5NCC3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Trim41Q5NCC3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Trim41Q5NCC3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Trim41Q5NCC3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Trim41Q5NCC3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Trim41Q5NCC3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC27.75■■■□□ 2.03
Trim41Q5NCC3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Trim41Q5NCC3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Trim41Q5NCC3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC27.75■■■□□ 2.03
Trim41Q5NCC3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Trim41Q5NCC3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC27.75■■■□□ 2.03
Trim41Q5NCC3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
Trim41Q5NCC3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC27.75■■■□□ 2.03
Trim41Q5NCC3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC27.75■■■□□ 2.03
Trim41Q5NCC3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Trim41Q5NCC3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Trim41Q5NCC3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
Trim41Q5NCC3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Trim41Q5NCC3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Trim41Q5NCC3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC27.74■■■□□ 2.03
Trim41Q5NCC3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Trim41Q5NCC3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Trim41Q5NCC3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC27.74■■■□□ 2.03
Trim41Q5NCC3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Trim41Q5NCC3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC27.74■■■□□ 2.03
Trim41Q5NCC3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Trim41Q5NCC3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC27.74■■■□□ 2.03
Trim41Q5NCC3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Trim41Q5NCC3 Gm8839-201ENSMUST00000121279 1645 ntBASIC27.74■■■□□ 2.03
Trim41Q5NCC3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC27.74■■■□□ 2.03
Trim41Q5NCC3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Trim41Q5NCC3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Trim41Q5NCC3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC27.73■■■□□ 2.03
Trim41Q5NCC3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Trim41Q5NCC3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
Trim41Q5NCC3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC27.73■■■□□ 2.03
Trim41Q5NCC3 Gm6184-201ENSMUST00000120403 1261 ntBASIC27.73■■■□□ 2.03
Trim41Q5NCC3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Trim41Q5NCC3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Trim41Q5NCC3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Trim41Q5NCC3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Trim41Q5NCC3 AC084391.1-201ENSMUST00000200651 141 ntBASIC27.73■■■□□ 2.03
Trim41Q5NCC3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC27.73■■■□□ 2.03
Trim41Q5NCC3 AC174742.1-201ENSMUST00000218272 304 ntBASIC27.73■■■□□ 2.03
Trim41Q5NCC3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
Trim41Q5NCC3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Trim41Q5NCC3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms