Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 AA414768-201ENSMUST00000121924 1257 ntBASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Gm45328-201ENSMUST00000210942 917 ntBASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf20Q5DTM8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf20Q5DTM8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf20Q5DTM8 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.16■□□□□ 0.66
Rnf20Q5DTM8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf20Q5DTM8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Rnf20Q5DTM8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf20Q5DTM8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf20Q5DTM8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
Rnf20Q5DTM8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rnf20Q5DTM8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf20Q5DTM8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf20Q5DTM8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.16■□□□□ 0.66
Rnf20Q5DTM8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Rnf20Q5DTM8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.16■□□□□ 0.66
Rnf20Q5DTM8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf20Q5DTM8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf20Q5DTM8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf20Q5DTM8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rnf20Q5DTM8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Gm29518-201ENSMUST00000190858 372 ntBASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Gm17808-201ENSMUST00000200859 894 ntBASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf20Q5DTM8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rnf20Q5DTM8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rnf20Q5DTM8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rnf20Q5DTM8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.14■□□□□ 0.66
Rnf20Q5DTM8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Rnf20Q5DTM8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf20Q5DTM8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf20Q5DTM8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf20Q5DTM8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.14■□□□□ 0.65
Rnf20Q5DTM8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf20Q5DTM8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf20Q5DTM8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf20Q5DTM8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf20Q5DTM8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf20Q5DTM8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf20Q5DTM8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf20Q5DTM8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf20Q5DTM8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf20Q5DTM8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf20Q5DTM8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf20Q5DTM8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms