Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Gm29518-201ENSMUST00000190858 372 ntBASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syne3Q4FZC9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Syne3Q4FZC9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Syne3Q4FZC9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Syne3Q4FZC9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Syne3Q4FZC9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Syne3Q4FZC9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Syne3Q4FZC9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Syne3Q4FZC9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Syne3Q4FZC9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.08■□□□□ 0.33
Syne3Q4FZC9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.08■□□□□ 0.33
Syne3Q4FZC9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.08■□□□□ 0.32
Syne3Q4FZC9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syne3Q4FZC9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syne3Q4FZC9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.08■□□□□ 0.32
Syne3Q4FZC9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Syne3Q4FZC9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Syne3Q4FZC9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syne3Q4FZC9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syne3Q4FZC9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.08■□□□□ 0.32
Syne3Q4FZC9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syne3Q4FZC9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Syne3Q4FZC9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
Syne3Q4FZC9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Syne3Q4FZC9 Gm11950-201ENSMUST00000121615 838 ntBASIC17.07■□□□□ 0.32
Syne3Q4FZC9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.07■□□□□ 0.32
Syne3Q4FZC9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.07■□□□□ 0.32
Syne3Q4FZC9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Syne3Q4FZC9 Gm17808-201ENSMUST00000200859 894 ntBASIC17.07■□□□□ 0.32
Syne3Q4FZC9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.07■□□□□ 0.32
Syne3Q4FZC9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.07■□□□□ 0.32
Syne3Q4FZC9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syne3Q4FZC9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syne3Q4FZC9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syne3Q4FZC9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syne3Q4FZC9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Syne3Q4FZC9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.07■□□□□ 0.32
Syne3Q4FZC9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Syne3Q4FZC9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syne3Q4FZC9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syne3Q4FZC9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syne3Q4FZC9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syne3Q4FZC9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syne3Q4FZC9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.07■□□□□ 0.32
Syne3Q4FZC9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Syne3Q4FZC9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syne3Q4FZC9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms