Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim40Q3UWA4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim40Q3UWA4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim40Q3UWA4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.14■□□□□ 0.01
Trim40Q3UWA4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Gm43183-201ENSMUST00000200632 547 ntBASIC15.14■□□□□ 0.01
Trim40Q3UWA4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim40Q3UWA4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Trmt13-210ENSMUST00000198454 880 ntBASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trim40Q3UWA4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Trim40Q3UWA4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim40Q3UWA4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim40Q3UWA4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim40Q3UWA4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim40Q3UWA4 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim40Q3UWA4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim40Q3UWA4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim40Q3UWA4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim40Q3UWA4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim40Q3UWA4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim40Q3UWA4 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.11■□□□□ 0.01
Trim40Q3UWA4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms