Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.11■□□□□ 0.17
Fam196aQ3USH1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Fam196aQ3USH1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Fam196aQ3USH1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Fam196aQ3USH1 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.11■□□□□ 0.17
Fam196aQ3USH1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Fam196aQ3USH1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Fam196aQ3USH1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Fam196aQ3USH1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Fam196aQ3USH1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Fam196aQ3USH1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Fam196aQ3USH1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Fam196aQ3USH1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Mir6404-201ENSMUST00000183699 94 ntBASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Gm36967-201ENSMUST00000193814 266 ntBASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Gm43125-201ENSMUST00000201724 730 ntBASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fam196aQ3USH1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam196aQ3USH1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Fam196aQ3USH1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam196aQ3USH1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam196aQ3USH1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam196aQ3USH1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam196aQ3USH1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Fam196aQ3USH1 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam196aQ3USH1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam196aQ3USH1 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.09■□□□□ 0.17
Fam196aQ3USH1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.09■□□□□ 0.17
Fam196aQ3USH1 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.09■□□□□ 0.17
Fam196aQ3USH1 Gm18889-201ENSMUST00000174284 929 ntBASIC16.09■□□□□ 0.17
Fam196aQ3USH1 Gm27430-201ENSMUST00000184585 107 ntBASIC16.09■□□□□ 0.17
Fam196aQ3USH1 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Fam196aQ3USH1 Gm44333-201ENSMUST00000197168 107 ntBASIC16.09■□□□□ 0.17
Fam196aQ3USH1 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.09■□□□□ 0.17
Fam196aQ3USH1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Fam196aQ3USH1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Fam196aQ3USH1 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.09■□□□□ 0.17
Fam196aQ3USH1 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam196aQ3USH1 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Fam196aQ3USH1 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam196aQ3USH1 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam196aQ3USH1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam196aQ3USH1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam196aQ3USH1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam196aQ3USH1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Fam196aQ3USH1 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.09■□□□□ 0.17
Fam196aQ3USH1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Fam196aQ3USH1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Fam196aQ3USH1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.08■□□□□ 0.17
Fam196aQ3USH1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Fam196aQ3USH1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Fam196aQ3USH1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Fam196aQ3USH1 Gm14127-201ENSMUST00000117906 678 ntBASIC16.08■□□□□ 0.16
Fam196aQ3USH1 Gm13823-201ENSMUST00000119930 345 ntBASIC16.08■□□□□ 0.16
Fam196aQ3USH1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.08■□□□□ 0.16
Fam196aQ3USH1 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Fam196aQ3USH1 Gm5177-201ENSMUST00000183092 997 ntBASIC16.08■□□□□ 0.16
Fam196aQ3USH1 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.08■□□□□ 0.16
Fam196aQ3USH1 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Fam196aQ3USH1 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam196aQ3USH1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Fam196aQ3USH1 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Fam196aQ3USH1 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Fam196aQ3USH1 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam196aQ3USH1 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Fam196aQ3USH1 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam196aQ3USH1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Fam196aQ3USH1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam196aQ3USH1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam196aQ3USH1 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Fam196aQ3USH1 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.08■□□□□ 0.16
Fam196aQ3USH1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fam196aQ3USH1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms