Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Naf1Q3UMQ8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Naf1Q3UMQ8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Naf1Q3UMQ8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Naf1Q3UMQ8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Naf1Q3UMQ8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Naf1Q3UMQ8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Naf1Q3UMQ8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Naf1Q3UMQ8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Naf1Q3UMQ8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Naf1Q3UMQ8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Naf1Q3UMQ8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Naf1Q3UMQ8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.31■□□□□ 0.2
Naf1Q3UMQ8 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.31■□□□□ 0.2
Naf1Q3UMQ8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Naf1Q3UMQ8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Naf1Q3UMQ8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Naf1Q3UMQ8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Naf1Q3UMQ8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Naf1Q3UMQ8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Naf1Q3UMQ8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Naf1Q3UMQ8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Naf1Q3UMQ8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Naf1Q3UMQ8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Naf1Q3UMQ8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Naf1Q3UMQ8 Gm25406-201ENSMUST00000157599 105 ntBASIC16.3■□□□□ 0.2
Naf1Q3UMQ8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Naf1Q3UMQ8 AW822252-206ENSMUST00000208904 237 ntBASIC16.3■□□□□ 0.2
Naf1Q3UMQ8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Naf1Q3UMQ8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Naf1Q3UMQ8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Naf1Q3UMQ8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Naf1Q3UMQ8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Naf1Q3UMQ8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Naf1Q3UMQ8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Naf1Q3UMQ8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Naf1Q3UMQ8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Naf1Q3UMQ8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Naf1Q3UMQ8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Naf1Q3UMQ8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Naf1Q3UMQ8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Gm13216-201ENSMUST00000117145 591 ntBASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Naf1Q3UMQ8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Naf1Q3UMQ8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms