Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Upf3bQ3ULL6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upf3bQ3ULL6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.22■□□□□ 0.35
Upf3bQ3ULL6 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upf3bQ3ULL6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upf3bQ3ULL6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upf3bQ3ULL6 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upf3bQ3ULL6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upf3bQ3ULL6 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upf3bQ3ULL6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upf3bQ3ULL6 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upf3bQ3ULL6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upf3bQ3ULL6 Gm13312-201ENSMUST00000119631 718 ntBASIC17.22■□□□□ 0.35
Upf3bQ3ULL6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.22■□□□□ 0.35
Upf3bQ3ULL6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.22■□□□□ 0.35
Upf3bQ3ULL6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Upf3bQ3ULL6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upf3bQ3ULL6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.22■□□□□ 0.35
Upf3bQ3ULL6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upf3bQ3ULL6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Upf3bQ3ULL6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Upf3bQ3ULL6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upf3bQ3ULL6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Upf3bQ3ULL6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Upf3bQ3ULL6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Upf3bQ3ULL6 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.21■□□□□ 0.35
Upf3bQ3ULL6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Upf3bQ3ULL6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Upf3bQ3ULL6 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Upf3bQ3ULL6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Upf3bQ3ULL6 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.21■□□□□ 0.35
Upf3bQ3ULL6 Mir3081-201ENSMUST00000175305 84 ntBASIC17.21■□□□□ 0.35
Upf3bQ3ULL6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Upf3bQ3ULL6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upf3bQ3ULL6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upf3bQ3ULL6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upf3bQ3ULL6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Upf3bQ3ULL6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Upf3bQ3ULL6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.2■□□□□ 0.34
Upf3bQ3ULL6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upf3bQ3ULL6 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upf3bQ3ULL6 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upf3bQ3ULL6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Upf3bQ3ULL6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Upf3bQ3ULL6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upf3bQ3ULL6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upf3bQ3ULL6 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upf3bQ3ULL6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Upf3bQ3ULL6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.2■□□□□ 0.34
Upf3bQ3ULL6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Upf3bQ3ULL6 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.2■□□□□ 0.34
Upf3bQ3ULL6 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upf3bQ3ULL6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Upf3bQ3ULL6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upf3bQ3ULL6 Dancr-204ENSMUST00000132389 2347 ntBASIC17.2■□□□□ 0.34
Upf3bQ3ULL6 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upf3bQ3ULL6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upf3bQ3ULL6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upf3bQ3ULL6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Gm27357-201ENSMUST00000183754 135 ntBASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Gm17807-201ENSMUST00000186869 298 ntBASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upf3bQ3ULL6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Upf3bQ3ULL6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Upf3bQ3ULL6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Upf3bQ3ULL6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Upf3bQ3ULL6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Upf3bQ3ULL6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Upf3bQ3ULL6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Upf3bQ3ULL6 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Upf3bQ3ULL6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms