Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC19■□□□□ 0.63
Col5a2Q3U962 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col5a2Q3U962 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC19■□□□□ 0.63
Col5a2Q3U962 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC19■□□□□ 0.63
Col5a2Q3U962 Gm5745-201ENSMUST00000183748 313 ntBASIC19■□□□□ 0.63
Col5a2Q3U962 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col5a2Q3U962 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col5a2Q3U962 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC19■□□□□ 0.63
Col5a2Q3U962 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col5a2Q3U962 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC19■□□□□ 0.63
Col5a2Q3U962 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col5a2Q3U962 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Col5a2Q3U962 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col5a2Q3U962 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col5a2Q3U962 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Col5a2Q3U962 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col5a2Q3U962 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col5a2Q3U962 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col5a2Q3U962 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col5a2Q3U962 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col5a2Q3U962 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Col5a2Q3U962 Mir449b-201ENSMUST00000104833 80 ntBASIC18.99■□□□□ 0.63
Col5a2Q3U962 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Col5a2Q3U962 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC18.99■□□□□ 0.63
Col5a2Q3U962 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.99■□□□□ 0.63
Col5a2Q3U962 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col5a2Q3U962 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Col5a2Q3U962 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col5a2Q3U962 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col5a2Q3U962 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Col5a2Q3U962 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col5a2Q3U962 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Col5a2Q3U962 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col5a2Q3U962 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col5a2Q3U962 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col5a2Q3U962 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.99■□□□□ 0.63
Col5a2Q3U962 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col5a2Q3U962 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col5a2Q3U962 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col5a2Q3U962 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Col5a2Q3U962 Rprl2-201ENSMUST00000157150 290 ntBASIC18.98■□□□□ 0.63
Col5a2Q3U962 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Col5a2Q3U962 CT025535.1-201ENSMUST00000227172 491 ntBASIC18.98■□□□□ 0.63
Col5a2Q3U962 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Col5a2Q3U962 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col5a2Q3U962 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Col5a2Q3U962 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col5a2Q3U962 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col5a2Q3U962 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Col5a2Q3U962 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col5a2Q3U962 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col5a2Q3U962 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col5a2Q3U962 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col5a2Q3U962 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
Col5a2Q3U962 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC18.97■□□□□ 0.63
Col5a2Q3U962 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.97■□□□□ 0.63
Col5a2Q3U962 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Col5a2Q3U962 Gm22175-201ENSMUST00000175007 78 ntBASIC18.97■□□□□ 0.63
Col5a2Q3U962 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.97■□□□□ 0.63
Col5a2Q3U962 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Col5a2Q3U962 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.97■□□□□ 0.63
Col5a2Q3U962 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Col5a2Q3U962 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col5a2Q3U962 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Col5a2Q3U962 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col5a2Q3U962 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col5a2Q3U962 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col5a2Q3U962 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col5a2Q3U962 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.97■□□□□ 0.63
Col5a2Q3U962 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col5a2Q3U962 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Col5a2Q3U962 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col5a2Q3U962 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.97■□□□□ 0.63
Col5a2Q3U962 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col5a2Q3U962 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col5a2Q3U962 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col5a2Q3U962 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a2Q3U962 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a2Q3U962 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a2Q3U962 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a2Q3U962 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Col5a2Q3U962 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a2Q3U962 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a2Q3U962 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a2Q3U962 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a2Q3U962 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a2Q3U962 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a2Q3U962 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Col5a2Q3U962 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a2Q3U962 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a2Q3U962 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a2Q3U962 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a2Q3U962 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a2Q3U962 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a2Q3U962 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a2Q3U962 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC18.96■□□□□ 0.63
Col5a2Q3U962 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a2Q3U962 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a2Q3U962 AC154767.3-201ENSMUST00000225150 1342 ntBASIC18.96■□□□□ 0.63
Col5a2Q3U962 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms