Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.94□□□□□ -0.18
Q3U1D9 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.94□□□□□ -0.18
Q3U1D9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Q3U1D9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Q3U1D9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Q3U1D9 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.94□□□□□ -0.18
Q3U1D9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Q3U1D9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Q3U1D9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Q3U1D9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Q3U1D9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.93□□□□□ -0.18
Q3U1D9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Q3U1D9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Gm8097-201ENSMUST00000117903 829 ntBASIC13.93□□□□□ -0.18
Q3U1D9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.93□□□□□ -0.18
Q3U1D9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.93□□□□□ -0.18
Q3U1D9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.93□□□□□ -0.18
Q3U1D9 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.93□□□□□ -0.18
Q3U1D9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Q3U1D9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Q3U1D9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3U1D9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3U1D9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Q3U1D9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3U1D9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Q3U1D9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3U1D9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3U1D9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3U1D9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3U1D9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3U1D9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Q3U1D9 Gm25990-201ENSMUST00000102440 86 ntBASIC13.92□□□□□ -0.18
Q3U1D9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Q3U1D9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.92□□□□□ -0.18
Q3U1D9 Mir5131-201ENSMUST00000175426 93 ntBASIC13.92□□□□□ -0.18
Q3U1D9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Q3U1D9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3U1D9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Q3U1D9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3U1D9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3U1D9 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.92□□□□□ -0.18
Q3U1D9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3U1D9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3U1D9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Q3U1D9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Q3U1D9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Q3U1D9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.92□□□□□ -0.18
Q3U1D9 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.92□□□□□ -0.18
Q3U1D9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Q3U1D9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Q3U1D9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Q3U1D9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Q3U1D9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Q3U1D9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Q3U1D9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Q3U1D9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Q3U1D9 Gm13418-201ENSMUST00000119097 944 ntBASIC13.91□□□□□ -0.18
Q3U1D9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Q3U1D9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.91□□□□□ -0.18
Q3U1D9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Q3U1D9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Q3U1D9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Q3U1D9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Q3U1D9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Q3U1D9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Q3U1D9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Q3U1D9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Q3U1D9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Q3U1D9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Q3U1D9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Q3U1D9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Q3U1D9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Q3U1D9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms