Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc4Q3TCX3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Gm43514-201ENSMUST00000198852 424 ntBASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc4Q3TCX3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Khdc4Q3TCX3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Khdc4Q3TCX3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Khdc4Q3TCX3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Khdc4Q3TCX3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Khdc4Q3TCX3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Khdc4Q3TCX3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Khdc4Q3TCX3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Khdc4Q3TCX3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Khdc4Q3TCX3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Khdc4Q3TCX3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Khdc4Q3TCX3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Khdc4Q3TCX3 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Khdc4Q3TCX3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 Gm12644-201ENSMUST00000119935 606 ntBASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms