Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cul4aQ3TCH7 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cul4aQ3TCH7 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cul4aQ3TCH7 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cul4aQ3TCH7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cul4aQ3TCH7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cul4aQ3TCH7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cul4aQ3TCH7 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cul4aQ3TCH7 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cul4aQ3TCH7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cul4aQ3TCH7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cul4aQ3TCH7 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.91■□□□□ 0.3
Cul4aQ3TCH7 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cul4aQ3TCH7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cul4aQ3TCH7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cul4aQ3TCH7 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cul4aQ3TCH7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cul4aQ3TCH7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.91■□□□□ 0.3
Cul4aQ3TCH7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.91■□□□□ 0.3
Cul4aQ3TCH7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cul4aQ3TCH7 Mir5130-201ENSMUST00000175160 84 ntBASIC16.91■□□□□ 0.3
Cul4aQ3TCH7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cul4aQ3TCH7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cul4aQ3TCH7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cul4aQ3TCH7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cul4aQ3TCH7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cul4aQ3TCH7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cul4aQ3TCH7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cul4aQ3TCH7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cul4aQ3TCH7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Cul4aQ3TCH7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Cul4aQ3TCH7 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cul4aQ3TCH7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cul4aQ3TCH7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cul4aQ3TCH7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cul4aQ3TCH7 Gm7889-201ENSMUST00000185591 958 ntBASIC16.89■□□□□ 0.29
Cul4aQ3TCH7 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cul4aQ3TCH7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cul4aQ3TCH7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cul4aQ3TCH7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cul4aQ3TCH7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cul4aQ3TCH7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Cul4aQ3TCH7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cul4aQ3TCH7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Cul4aQ3TCH7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cul4aQ3TCH7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cul4aQ3TCH7 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cul4aQ3TCH7 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cul4aQ3TCH7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cul4aQ3TCH7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cul4aQ3TCH7 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cul4aQ3TCH7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cul4aQ3TCH7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.87■□□□□ 0.29
Cul4aQ3TCH7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms