Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col9a2Q07643 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.41■□□□□ 0.38
Col9a2Q07643 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col9a2Q07643 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Col9a2Q07643 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col9a2Q07643 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col9a2Q07643 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a2Q07643 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a2Q07643 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a2Q07643 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a2Q07643 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.4■□□□□ 0.38
Col9a2Q07643 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a2Q07643 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a2Q07643 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a2Q07643 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.4■□□□□ 0.38
Col9a2Q07643 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.4■□□□□ 0.38
Col9a2Q07643 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a2Q07643 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a2Q07643 Gm6550-201ENSMUST00000187574 993 ntBASIC17.4■□□□□ 0.38
Col9a2Q07643 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.4■□□□□ 0.38
Col9a2Q07643 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a2Q07643 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a2Q07643 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a2Q07643 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.4■□□□□ 0.38
Col9a2Q07643 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a2Q07643 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Col9a2Q07643 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Col9a2Q07643 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Col9a2Q07643 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col9a2Q07643 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col9a2Q07643 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col9a2Q07643 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col9a2Q07643 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col9a2Q07643 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Col9a2Q07643 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.39■□□□□ 0.37
Col9a2Q07643 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.39■□□□□ 0.37
Col9a2Q07643 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col9a2Q07643 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Col9a2Q07643 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
Col9a2Q07643 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.39■□□□□ 0.37
Col9a2Q07643 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.39■□□□□ 0.37
Col9a2Q07643 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.39■□□□□ 0.37
Col9a2Q07643 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.39■□□□□ 0.37
Col9a2Q07643 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col9a2Q07643 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.39■□□□□ 0.37
Col9a2Q07643 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.39■□□□□ 0.37
Col9a2Q07643 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col9a2Q07643 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.39■□□□□ 0.37
Col9a2Q07643 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.39■□□□□ 0.37
Col9a2Q07643 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.39■□□□□ 0.37
Col9a2Q07643 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.39■□□□□ 0.37
Col9a2Q07643 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.39■□□□□ 0.37
Col9a2Q07643 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col9a2Q07643 Gm8825-201ENSMUST00000182565 998 ntBASIC17.39■□□□□ 0.37
Col9a2Q07643 Gm4518-201ENSMUST00000182638 718 ntBASIC17.39■□□□□ 0.37
Col9a2Q07643 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.39■□□□□ 0.37
Col9a2Q07643 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.39■□□□□ 0.37
Col9a2Q07643 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.39■□□□□ 0.37
Col9a2Q07643 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.39■□□□□ 0.37
Col9a2Q07643 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.39■□□□□ 0.37
Col9a2Q07643 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.39■□□□□ 0.37
Col9a2Q07643 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col9a2Q07643 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col9a2Q07643 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col9a2Q07643 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col9a2Q07643 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Col9a2Q07643 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col9a2Q07643 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Col9a2Q07643 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col9a2Q07643 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Col9a2Q07643 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col9a2Q07643 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col9a2Q07643 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col9a2Q07643 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col9a2Q07643 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col9a2Q07643 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col9a2Q07643 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col9a2Q07643 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col9a2Q07643 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col9a2Q07643 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col9a2Q07643 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.38■□□□□ 0.37
Col9a2Q07643 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col9a2Q07643 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col9a2Q07643 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col9a2Q07643 Gm4995-201ENSMUST00000117247 432 ntBASIC17.38■□□□□ 0.37
Col9a2Q07643 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col9a2Q07643 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.38■□□□□ 0.37
Col9a2Q07643 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col9a2Q07643 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Col9a2Q07643 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col9a2Q07643 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.38■□□□□ 0.37
Col9a2Q07643 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.38■□□□□ 0.37
Col9a2Q07643 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.38■□□□□ 0.37
Col9a2Q07643 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.38■□□□□ 0.37
Col9a2Q07643 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col9a2Q07643 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Col9a2Q07643 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col9a2Q07643 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col9a2Q07643 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col9a2Q07643 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms