Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hspg2Q05793 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hspg2Q05793 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Hspg2Q05793 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hspg2Q05793 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hspg2Q05793 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hspg2Q05793 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hspg2Q05793 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hspg2Q05793 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hspg2Q05793 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.78□□□□□ -0.52
Hspg2Q05793 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hspg2Q05793 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hspg2Q05793 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hspg2Q05793 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hspg2Q05793 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hspg2Q05793 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Hspg2Q05793 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.78□□□□□ -0.52
Hspg2Q05793 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hspg2Q05793 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Hspg2Q05793 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hspg2Q05793 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Hspg2Q05793 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hspg2Q05793 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hspg2Q05793 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hspg2Q05793 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.78□□□□□ -0.52
Hspg2Q05793 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hspg2Q05793 Gm10616-201ENSMUST00000205285 2127 ntBASIC11.78□□□□□ -0.52
Hspg2Q05793 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hspg2Q05793 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hspg2Q05793 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hspg2Q05793 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hspg2Q05793 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hspg2Q05793 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Hspg2Q05793 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hspg2Q05793 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hspg2Q05793 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Hspg2Q05793 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hspg2Q05793 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hspg2Q05793 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hspg2Q05793 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hspg2Q05793 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Hspg2Q05793 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hspg2Q05793 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Hspg2Q05793 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Hspg2Q05793 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hspg2Q05793 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Hspg2Q05793 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Hspg2Q05793 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.77□□□□□ -0.53
Hspg2Q05793 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hspg2Q05793 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.77□□□□□ -0.53
Hspg2Q05793 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hspg2Q05793 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hspg2Q05793 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hspg2Q05793 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hspg2Q05793 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hspg2Q05793 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.77□□□□□ -0.53
Hspg2Q05793 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.77□□□□□ -0.53
Hspg2Q05793 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Hspg2Q05793 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hspg2Q05793 Haglr-201ENSMUST00000100000 2085 ntBASIC11.77□□□□□ -0.53
Hspg2Q05793 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hspg2Q05793 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hspg2Q05793 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hspg2Q05793 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hspg2Q05793 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hspg2Q05793 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hspg2Q05793 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hspg2Q05793 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hspg2Q05793 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hspg2Q05793 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hspg2Q05793 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hspg2Q05793 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hspg2Q05793 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hspg2Q05793 Gm27437-201ENSMUST00000183429 107 ntBASIC11.76□□□□□ -0.53
Hspg2Q05793 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Hspg2Q05793 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC11.76□□□□□ -0.53
Hspg2Q05793 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hspg2Q05793 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.76□□□□□ -0.53
Hspg2Q05793 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.76□□□□□ -0.53
Hspg2Q05793 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hspg2Q05793 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hspg2Q05793 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hspg2Q05793 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.76□□□□□ -0.53
Hspg2Q05793 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hspg2Q05793 Gm13823-201ENSMUST00000119930 345 ntBASIC11.76□□□□□ -0.53
Hspg2Q05793 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.76□□□□□ -0.53
Hspg2Q05793 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.76□□□□□ -0.53
Hspg2Q05793 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.76□□□□□ -0.53
Hspg2Q05793 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hspg2Q05793 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hspg2Q05793 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hspg2Q05793 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hspg2Q05793 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hspg2Q05793 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hspg2Q05793 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.76□□□□□ -0.53
Hspg2Q05793 Gm22175-201ENSMUST00000175007 78 ntBASIC11.76□□□□□ -0.53
Hspg2Q05793 Gm20553-201ENSMUST00000204205 844 ntBASIC11.76□□□□□ -0.53
Hspg2Q05793 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.76□□□□□ -0.53
Hspg2Q05793 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.76□□□□□ -0.53
Hspg2Q05793 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms