Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Npas1P97459 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Npas1P97459 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Npas1P97459 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Npas1P97459 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Npas1P97459 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.55□□□□□ -0.24
Npas1P97459 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.55□□□□□ -0.24
Npas1P97459 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Npas1P97459 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Npas1P97459 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Npas1P97459 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Npas1P97459 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Npas1P97459 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Npas1P97459 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Npas1P97459 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 Gm24841-201ENSMUST00000158676 357 ntBASIC13.54□□□□□ -0.24
Npas1P97459 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.54□□□□□ -0.24
Npas1P97459 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 Gm37292-201ENSMUST00000192062 758 ntBASIC13.54□□□□□ -0.24
Npas1P97459 Gm10517-202ENSMUST00000192970 758 ntBASIC13.54□□□□□ -0.24
Npas1P97459 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.54□□□□□ -0.24
Npas1P97459 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.54□□□□□ -0.24
Npas1P97459 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Npas1P97459 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Npas1P97459 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Npas1P97459 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.53□□□□□ -0.24
Npas1P97459 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Npas1P97459 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.53□□□□□ -0.24
Npas1P97459 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 Gm8495-201ENSMUST00000188740 694 ntBASIC13.53□□□□□ -0.24
Npas1P97459 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.53□□□□□ -0.24
Npas1P97459 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.53□□□□□ -0.24
Npas1P97459 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Npas1P97459 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Npas1P97459 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Npas1P97459 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.52□□□□□ -0.24
Npas1P97459 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
Npas1P97459 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Npas1P97459 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Npas1P97459 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Npas1P97459 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Npas1P97459 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Npas1P97459 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Npas1P97459 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.24
Npas1P97459 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Npas1P97459 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Npas1P97459 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.52□□□□□ -0.25
Npas1P97459 Gm13158-201ENSMUST00000122007 736 ntBASIC13.52□□□□□ -0.25
Npas1P97459 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Npas1P97459 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Npas1P97459 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Npas1P97459 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Npas1P97459 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Npas1P97459 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Npas1P97459 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Npas1P97459 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Npas1P97459 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms