Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lig3P97386 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Lig3P97386 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Lig3P97386 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lig3P97386 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.51■□□□□ 0.39
Lig3P97386 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lig3P97386 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lig3P97386 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lig3P97386 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lig3P97386 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lig3P97386 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lig3P97386 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lig3P97386 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.51■□□□□ 0.39
Lig3P97386 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Lig3P97386 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.51■□□□□ 0.39
Lig3P97386 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lig3P97386 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lig3P97386 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Lig3P97386 Rps4l-201ENSMUST00000071745 943 ntBASIC17.51■□□□□ 0.39
Lig3P97386 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Lig3P97386 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lig3P97386 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lig3P97386 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Lig3P97386 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lig3P97386 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lig3P97386 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lig3P97386 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lig3P97386 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lig3P97386 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Lig3P97386 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lig3P97386 Gm15372-201ENSMUST00000120729 834 ntBASIC17.5■□□□□ 0.39
Lig3P97386 Gm1401-201ENSMUST00000122048 772 ntBASIC17.5■□□□□ 0.39
Lig3P97386 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lig3P97386 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lig3P97386 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lig3P97386 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lig3P97386 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lig3P97386 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Lig3P97386 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.5■□□□□ 0.39
Lig3P97386 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.5■□□□□ 0.39
Lig3P97386 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lig3P97386 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lig3P97386 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lig3P97386 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lig3P97386 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lig3P97386 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lig3P97386 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Lig3P97386 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lig3P97386 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Lig3P97386 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lig3P97386 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lig3P97386 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lig3P97386 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lig3P97386 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lig3P97386 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lig3P97386 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lig3P97386 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lig3P97386 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Lig3P97386 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.49■□□□□ 0.39
Lig3P97386 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.49■□□□□ 0.39
Lig3P97386 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lig3P97386 Gm8000-201ENSMUST00000188378 592 ntBASIC17.49■□□□□ 0.39
Lig3P97386 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.49■□□□□ 0.39
Lig3P97386 Gm2213-201ENSMUST00000197485 688 ntBASIC17.49■□□□□ 0.39
Lig3P97386 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Lig3P97386 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.49■□□□□ 0.39
Lig3P97386 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.49■□□□□ 0.39
Lig3P97386 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.49■□□□□ 0.39
Lig3P97386 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lig3P97386 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Lig3P97386 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lig3P97386 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lig3P97386 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lig3P97386 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lig3P97386 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lig3P97386 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.49■□□□□ 0.39
Lig3P97386 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lig3P97386 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lig3P97386 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lig3P97386 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lig3P97386 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lig3P97386 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lig3P97386 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lig3P97386 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lig3P97386 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lig3P97386 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lig3P97386 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lig3P97386 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Lig3P97386 Gm11594-201ENSMUST00000122313 162 ntBASIC17.48■□□□□ 0.39
Lig3P97386 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lig3P97386 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lig3P97386 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lig3P97386 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lig3P97386 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.48■□□□□ 0.39
Lig3P97386 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
Lig3P97386 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.48■□□□□ 0.39
Lig3P97386 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lig3P97386 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lig3P97386 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lig3P97386 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms