Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trim43cP86449 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trim43cP86449 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43cP86449 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43cP86449 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43cP86449 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43cP86449 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43cP86449 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43cP86449 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43cP86449 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43cP86449 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.5■□□□□ 0.39
Trim43cP86449 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43cP86449 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43cP86449 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.5■□□□□ 0.39
Trim43cP86449 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Trim43cP86449 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43cP86449 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43cP86449 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43cP86449 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43cP86449 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43cP86449 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trim43cP86449 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43cP86449 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43cP86449 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43cP86449 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43cP86449 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43cP86449 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trim43cP86449 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43cP86449 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43cP86449 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43cP86449 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Trim43cP86449 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43cP86449 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43cP86449 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43cP86449 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43cP86449 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43cP86449 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43cP86449 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43cP86449 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43cP86449 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43cP86449 Gm7284-201ENSMUST00000131667 944 ntBASIC17.49■□□□□ 0.39
Trim43cP86449 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43cP86449 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.49■□□□□ 0.39
Trim43cP86449 Gm27357-201ENSMUST00000183754 135 ntBASIC17.49■□□□□ 0.39
Trim43cP86449 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trim43cP86449 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trim43cP86449 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.49■□□□□ 0.39
Trim43cP86449 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43cP86449 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trim43cP86449 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trim43cP86449 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43cP86449 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim43cP86449 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.49■□□□□ 0.39
Trim43cP86449 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43cP86449 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43cP86449 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43cP86449 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43cP86449 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43cP86449 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43cP86449 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43cP86449 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43cP86449 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43cP86449 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim43cP86449 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim43cP86449 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43cP86449 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43cP86449 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43cP86449 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43cP86449 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43cP86449 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43cP86449 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43cP86449 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43cP86449 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43cP86449 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43cP86449 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trim43cP86449 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43cP86449 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43cP86449 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.47■□□□□ 0.39
Trim43cP86449 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.47■□□□□ 0.39
Trim43cP86449 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Trim43cP86449 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43cP86449 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43cP86449 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.47■□□□□ 0.39
Trim43cP86449 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.47■□□□□ 0.39
Trim43cP86449 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43cP86449 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43cP86449 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trim43cP86449 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43cP86449 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43cP86449 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trim43cP86449 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43cP86449 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim43cP86449 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Trim43cP86449 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43cP86449 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43cP86449 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Trim43cP86449 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43cP86449 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43cP86449 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.46■□□□□ 0.39
Trim43cP86449 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms