Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SgcaP82350 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.53□□□□□ -0.24
SgcaP82350 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SgcaP82350 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SgcaP82350 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SgcaP82350 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SgcaP82350 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
SgcaP82350 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SgcaP82350 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SgcaP82350 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
SgcaP82350 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SgcaP82350 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SgcaP82350 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcaP82350 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcaP82350 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SgcaP82350 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcaP82350 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
SgcaP82350 Gm18025-201ENSMUST00000221733 862 ntBASIC13.52□□□□□ -0.25
SgcaP82350 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.52□□□□□ -0.25
SgcaP82350 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcaP82350 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcaP82350 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcaP82350 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcaP82350 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcaP82350 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcaP82350 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SgcaP82350 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
SgcaP82350 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.52□□□□□ -0.25
SgcaP82350 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcaP82350 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcaP82350 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcaP82350 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcaP82350 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcaP82350 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcaP82350 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SgcaP82350 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcaP82350 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgcaP82350 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgcaP82350 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SgcaP82350 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgcaP82350 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SgcaP82350 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgcaP82350 Gm12382-201ENSMUST00000122005 922 ntBASIC13.51□□□□□ -0.25
SgcaP82350 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.51□□□□□ -0.25
SgcaP82350 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.51□□□□□ -0.25
SgcaP82350 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgcaP82350 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.51□□□□□ -0.25
SgcaP82350 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
SgcaP82350 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SgcaP82350 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgcaP82350 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgcaP82350 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.51□□□□□ -0.25
SgcaP82350 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgcaP82350 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
SgcaP82350 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgcaP82350 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.51□□□□□ -0.25
SgcaP82350 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgcaP82350 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SgcaP82350 Asic1-205ENSMUST00000228185 1818 ntBASIC13.5□□□□□ -0.25
SgcaP82350 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcaP82350 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SgcaP82350 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcaP82350 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SgcaP82350 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
SgcaP82350 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcaP82350 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
SgcaP82350 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcaP82350 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SgcaP82350 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcaP82350 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcaP82350 Dio3-201ENSMUST00000097228 1449 ntBASIC13.5□□□□□ -0.25
SgcaP82350 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SgcaP82350 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.5□□□□□ -0.25
SgcaP82350 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcaP82350 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcaP82350 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
SgcaP82350 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcaP82350 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SgcaP82350 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.5□□□□□ -0.25
SgcaP82350 Gm17661-201ENSMUST00000170317 270 ntBASIC13.5□□□□□ -0.25
SgcaP82350 Gm27000-201ENSMUST00000182943 842 ntBASIC13.5□□□□□ -0.25
SgcaP82350 Gm37025-201ENSMUST00000195159 829 ntBASIC13.5□□□□□ -0.25
SgcaP82350 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SgcaP82350 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.5□□□□□ -0.25
SgcaP82350 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcaP82350 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcaP82350 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SgcaP82350 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SgcaP82350 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcaP82350 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.5□□□□□ -0.25
SgcaP82350 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcaP82350 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcaP82350 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.5□□□□□ -0.25
SgcaP82350 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcaP82350 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.5□□□□□ -0.25
SgcaP82350 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcaP82350 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcaP82350 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SgcaP82350 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SgcaP82350 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms