Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CiitaP79621 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CiitaP79621 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.39■□□□□ 0.37
CiitaP79621 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CiitaP79621 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CiitaP79621 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.39■□□□□ 0.37
CiitaP79621 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CiitaP79621 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.39■□□□□ 0.37
CiitaP79621 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.39■□□□□ 0.37
CiitaP79621 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.39■□□□□ 0.37
CiitaP79621 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CiitaP79621 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CiitaP79621 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CiitaP79621 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CiitaP79621 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CiitaP79621 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CiitaP79621 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CiitaP79621 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CiitaP79621 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CiitaP79621 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CiitaP79621 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CiitaP79621 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CiitaP79621 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CiitaP79621 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CiitaP79621 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CiitaP79621 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CiitaP79621 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.38■□□□□ 0.37
CiitaP79621 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.38■□□□□ 0.37
CiitaP79621 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.38■□□□□ 0.37
CiitaP79621 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CiitaP79621 Gm10060-201ENSMUST00000212002 111 ntBASIC17.38■□□□□ 0.37
CiitaP79621 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.38■□□□□ 0.37
CiitaP79621 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.38■□□□□ 0.37
CiitaP79621 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CiitaP79621 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CiitaP79621 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CiitaP79621 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CiitaP79621 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CiitaP79621 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CiitaP79621 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CiitaP79621 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CiitaP79621 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CiitaP79621 Haglr-201ENSMUST00000100000 2085 ntBASIC17.38■□□□□ 0.37
CiitaP79621 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.38■□□□□ 0.37
CiitaP79621 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CiitaP79621 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CiitaP79621 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CiitaP79621 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CiitaP79621 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.37■□□□□ 0.37
CiitaP79621 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CiitaP79621 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CiitaP79621 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CiitaP79621 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CiitaP79621 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CiitaP79621 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.37■□□□□ 0.37
CiitaP79621 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.37■□□□□ 0.37
CiitaP79621 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.37■□□□□ 0.37
CiitaP79621 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CiitaP79621 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CiitaP79621 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CiitaP79621 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CiitaP79621 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CiitaP79621 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CiitaP79621 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CiitaP79621 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CiitaP79621 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.37■□□□□ 0.37
CiitaP79621 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CiitaP79621 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CiitaP79621 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CiitaP79621 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CiitaP79621 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CiitaP79621 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CiitaP79621 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.36■□□□□ 0.37
CiitaP79621 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.36■□□□□ 0.37
CiitaP79621 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
CiitaP79621 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CiitaP79621 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CiitaP79621 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CiitaP79621 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.36■□□□□ 0.37
CiitaP79621 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CiitaP79621 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CiitaP79621 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CiitaP79621 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CiitaP79621 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CiitaP79621 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CiitaP79621 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CiitaP79621 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CiitaP79621 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CiitaP79621 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CiitaP79621 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CiitaP79621 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CiitaP79621 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CiitaP79621 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CiitaP79621 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CiitaP79621 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CiitaP79621 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CiitaP79621 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.35■□□□□ 0.37
CiitaP79621 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CiitaP79621 Gm18733-201ENSMUST00000173950 856 ntBASIC17.35■□□□□ 0.37
CiitaP79621 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms