Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cxcr4P70658 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cxcr4P70658 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cxcr4P70658 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cxcr4P70658 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Cxcr4P70658 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.12■□□□□ 0.01
Cxcr4P70658 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cxcr4P70658 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cxcr4P70658 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcr4P70658 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcr4P70658 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcr4P70658 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Cxcr4P70658 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcr4P70658 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcr4P70658 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcr4P70658 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.11■□□□□ 0.01
Cxcr4P70658 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcr4P70658 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cxcr4P70658 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcr4P70658 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcr4P70658 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.11■□□□□ 0.01
Cxcr4P70658 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cxcr4P70658 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.11■□□□□ 0.01
Cxcr4P70658 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.11■□□□□ 0.01
Cxcr4P70658 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcr4P70658 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcr4P70658 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcr4P70658 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcr4P70658 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcr4P70658 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cxcr4P70658 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcr4P70658 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcr4P70658 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcr4P70658 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcr4P70658 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcr4P70658 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.11■□□□□ 0.01
Cxcr4P70658 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcr4P70658 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cxcr4P70658 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcr4P70658 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcr4P70658 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Cxcr4P70658 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcr4P70658 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcr4P70658 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcr4P70658 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cxcr4P70658 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.1■□□□□ 0.01
Cxcr4P70658 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcr4P70658 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cxcr4P70658 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.1■□□□□ 0.01
Cxcr4P70658 Gm5587-201ENSMUST00000206270 674 ntBASIC15.1■□□□□ 0.01
Cxcr4P70658 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcr4P70658 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcr4P70658 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Cxcr4P70658 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcr4P70658 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcr4P70658 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcr4P70658 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcr4P70658 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Cxcr4P70658 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcr4P70658 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcr4P70658 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
Cxcr4P70658 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcr4P70658 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.1■□□□□ 0.01
Cxcr4P70658 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcr4P70658 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcr4P70658 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cxcr4P70658 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cxcr4P70658 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcr4P70658 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcr4P70658 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.09■□□□□ 0.01
Cxcr4P70658 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcr4P70658 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcr4P70658 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Cxcr4P70658 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcr4P70658 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcr4P70658 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcr4P70658 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcr4P70658 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcr4P70658 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcr4P70658 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Cxcr4P70658 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcr4P70658 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.09■□□□□ 0.01
Cxcr4P70658 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcr4P70658 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcr4P70658 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Cxcr4P70658 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcr4P70658 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.09■□□□□ 0.01
Cxcr4P70658 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcr4P70658 Gm10566-201ENSMUST00000086739 996 ntBASIC15.09■□□□□ 0.01
Cxcr4P70658 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcr4P70658 Prob1-201ENSMUST00000097619 3021 ntBASIC15.09■□□□□ 0.01
Cxcr4P70658 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcr4P70658 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcr4P70658 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcr4P70658 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcr4P70658 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcr4P70658 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcr4P70658 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cxcr4P70658 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cxcr4P70658 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms