Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ufd1P70362 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ufd1P70362 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ufd1P70362 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ufd1P70362 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ufd1P70362 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.87□□□□□ -0.19
Ufd1P70362 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.87□□□□□ -0.19
Ufd1P70362 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ufd1P70362 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ufd1P70362 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Ufd1P70362 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ufd1P70362 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ufd1P70362 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.86□□□□□ -0.19
Ufd1P70362 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ufd1P70362 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ufd1P70362 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ufd1P70362 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ufd1P70362 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.86□□□□□ -0.19
Ufd1P70362 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ufd1P70362 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ufd1P70362 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ufd1P70362 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ufd1P70362 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.86□□□□□ -0.19
Ufd1P70362 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ufd1P70362 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ufd1P70362 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ufd1P70362 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ufd1P70362 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ufd1P70362 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ufd1P70362 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ufd1P70362 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ufd1P70362 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ufd1P70362 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ufd1P70362 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Ufd1P70362 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ufd1P70362 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ufd1P70362 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ufd1P70362 Gm26524-201ENSMUST00000192339 390 ntBASIC13.85□□□□□ -0.19
Ufd1P70362 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ufd1P70362 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ufd1P70362 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ufd1P70362 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ufd1P70362 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ufd1P70362 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ufd1P70362 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ufd1P70362 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ufd1P70362 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ufd1P70362 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ufd1P70362 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ufd1P70362 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ufd1P70362 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ufd1P70362 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ufd1P70362 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ufd1P70362 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Ufd1P70362 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ufd1P70362 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ufd1P70362 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ufd1P70362 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.84□□□□□ -0.19
Ufd1P70362 Rab3c-203ENSMUST00000224180 967 ntBASIC13.84□□□□□ -0.19
Ufd1P70362 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ufd1P70362 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ufd1P70362 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ufd1P70362 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.84□□□□□ -0.19
Ufd1P70362 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ufd1P70362 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ufd1P70362 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ufd1P70362 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ufd1P70362 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ufd1P70362 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ufd1P70362 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ufd1P70362 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Ufd1P70362 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ufd1P70362 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
Ufd1P70362 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Ufd1P70362 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ufd1P70362 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.83□□□□□ -0.2
Ufd1P70362 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ufd1P70362 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.83□□□□□ -0.2
Ufd1P70362 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.83□□□□□ -0.2
Ufd1P70362 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ufd1P70362 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ufd1P70362 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ufd1P70362 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ufd1P70362 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ufd1P70362 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ufd1P70362 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ufd1P70362 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.83□□□□□ -0.2
Ufd1P70362 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Ufd1P70362 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ufd1P70362 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.83□□□□□ -0.2
Ufd1P70362 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ufd1P70362 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ufd1P70362 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ufd1P70362 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ufd1P70362 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ufd1P70362 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ufd1P70362 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ufd1P70362 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ufd1P70362 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Ufd1P70362 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms