Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PrkcbP68404 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrkcbP68404 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PrkcbP68404 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrkcbP68404 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrkcbP68404 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
PrkcbP68404 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.36■□□□□ 0.37
PrkcbP68404 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.36■□□□□ 0.37
PrkcbP68404 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.36■□□□□ 0.37
PrkcbP68404 Gm6296-201ENSMUST00000222599 943 ntBASIC17.36■□□□□ 0.37
PrkcbP68404 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
PrkcbP68404 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.36■□□□□ 0.37
PrkcbP68404 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrkcbP68404 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrkcbP68404 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrkcbP68404 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrkcbP68404 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrkcbP68404 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrkcbP68404 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrkcbP68404 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PrkcbP68404 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PrkcbP68404 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PrkcbP68404 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PrkcbP68404 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PrkcbP68404 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PrkcbP68404 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PrkcbP68404 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PrkcbP68404 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PrkcbP68404 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PrkcbP68404 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PrkcbP68404 Gm6376-201ENSMUST00000209407 580 ntBASIC17.35■□□□□ 0.37
PrkcbP68404 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.35■□□□□ 0.37
PrkcbP68404 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.35■□□□□ 0.37
PrkcbP68404 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PrkcbP68404 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PrkcbP68404 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PrkcbP68404 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PrkcbP68404 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.35■□□□□ 0.37
PrkcbP68404 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PrkcbP68404 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PrkcbP68404 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.34■□□□□ 0.37
PrkcbP68404 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PrkcbP68404 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PrkcbP68404 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
PrkcbP68404 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.34■□□□□ 0.37
PrkcbP68404 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PrkcbP68404 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.34■□□□□ 0.37
PrkcbP68404 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PrkcbP68404 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PrkcbP68404 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PrkcbP68404 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.34■□□□□ 0.37
PrkcbP68404 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PrkcbP68404 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PrkcbP68404 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PrkcbP68404 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PrkcbP68404 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PrkcbP68404 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PrkcbP68404 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PrkcbP68404 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PrkcbP68404 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PrkcbP68404 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PrkcbP68404 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PrkcbP68404 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PrkcbP68404 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.33■□□□□ 0.36
PrkcbP68404 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PrkcbP68404 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PrkcbP68404 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PrkcbP68404 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PrkcbP68404 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PrkcbP68404 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PrkcbP68404 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PrkcbP68404 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PrkcbP68404 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PrkcbP68404 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PrkcbP68404 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PrkcbP68404 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
PrkcbP68404 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PrkcbP68404 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PrkcbP68404 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PrkcbP68404 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PrkcbP68404 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.32■□□□□ 0.36
PrkcbP68404 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PrkcbP68404 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.32■□□□□ 0.36
PrkcbP68404 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
PrkcbP68404 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PrkcbP68404 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.32■□□□□ 0.36
PrkcbP68404 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PrkcbP68404 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PrkcbP68404 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PrkcbP68404 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PrkcbP68404 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.32■□□□□ 0.36
PrkcbP68404 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
PrkcbP68404 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PrkcbP68404 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PrkcbP68404 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PrkcbP68404 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PrkcbP68404 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PrkcbP68404 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PrkcbP68404 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.32■□□□□ 0.36
PrkcbP68404 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms