Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Hmgb1P63158 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgb1P63158 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgb1P63158 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgb1P63158 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgb1P63158 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hmgb1P63158 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Hmgb1P63158 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.7■□□□□ 0.42
Hmgb1P63158 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Hmgb1P63158 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmgb1P63158 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hmgb1P63158 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.7■□□□□ 0.42
Hmgb1P63158 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmgb1P63158 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmgb1P63158 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmgb1P63158 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmgb1P63158 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmgb1P63158 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmgb1P63158 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hmgb1P63158 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hmgb1P63158 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmgb1P63158 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Hmgb1P63158 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgb1P63158 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgb1P63158 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgb1P63158 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgb1P63158 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Hmgb1P63158 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgb1P63158 Gm6433-201ENSMUST00000118634 875 ntBASIC17.69■□□□□ 0.42
Hmgb1P63158 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Hmgb1P63158 Gm22697-201ENSMUST00000175194 63 ntBASIC17.69■□□□□ 0.42
Hmgb1P63158 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Hmgb1P63158 Gm37722-201ENSMUST00000193757 208 ntBASIC17.69■□□□□ 0.42
Hmgb1P63158 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgb1P63158 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgb1P63158 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgb1P63158 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Hmgb1P63158 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
Hmgb1P63158 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgb1P63158 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.69■□□□□ 0.42
Hmgb1P63158 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgb1P63158 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgb1P63158 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgb1P63158 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgb1P63158 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgb1P63158 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Hmgb1P63158 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgb1P63158 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Hmgb1P63158 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.68■□□□□ 0.42
Hmgb1P63158 Gm15565-201ENSMUST00000118890 427 ntBASIC17.68■□□□□ 0.42
Hmgb1P63158 Gm11355-201ENSMUST00000121120 306 ntBASIC17.68■□□□□ 0.42
Hmgb1P63158 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.68■□□□□ 0.42
Hmgb1P63158 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgb1P63158 Gm18101-201ENSMUST00000215769 548 ntBASIC17.68■□□□□ 0.42
Hmgb1P63158 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgb1P63158 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Hmgb1P63158 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgb1P63158 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgb1P63158 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgb1P63158 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgb1P63158 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgb1P63158 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hmgb1P63158 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgb1P63158 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgb1P63158 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgb1P63158 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgb1P63158 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgb1P63158 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgb1P63158 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.67■□□□□ 0.42
Hmgb1P63158 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hmgb1P63158 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgb1P63158 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgb1P63158 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Hmgb1P63158 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgb1P63158 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hmgb1P63158 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.67■□□□□ 0.42
Hmgb1P63158 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.67■□□□□ 0.42
Hmgb1P63158 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgb1P63158 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgb1P63158 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Hmgb1P63158 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Hmgb1P63158 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgb1P63158 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgb1P63158 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgb1P63158 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hmgb1P63158 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgb1P63158 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgb1P63158 Gm37660-201ENSMUST00000192754 1732 ntBASIC17.67■□□□□ 0.42
Hmgb1P63158 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.67■□□□□ 0.42
Hmgb1P63158 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgb1P63158 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.66■□□□□ 0.42
Hmgb1P63158 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Hmgb1P63158 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgb1P63158 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.66■□□□□ 0.42
Hmgb1P63158 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgb1P63158 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgb1P63158 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgb1P63158 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Hmgb1P63158 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
Hmgb1P63158 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms