Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pfn1P62962 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pfn1P62962 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfn1P62962 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pfn1P62962 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pfn1P62962 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.53□□□□□ -0.4
Pfn1P62962 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfn1P62962 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pfn1P62962 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfn1P62962 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.53□□□□□ -0.4
Pfn1P62962 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfn1P62962 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Pfn1P62962 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfn1P62962 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.53□□□□□ -0.4
Pfn1P62962 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfn1P62962 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.53□□□□□ -0.4
Pfn1P62962 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfn1P62962 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.53□□□□□ -0.4
Pfn1P62962 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.53□□□□□ -0.4
Pfn1P62962 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfn1P62962 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfn1P62962 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfn1P62962 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfn1P62962 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfn1P62962 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.53□□□□□ -0.4
Pfn1P62962 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfn1P62962 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pfn1P62962 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfn1P62962 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfn1P62962 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfn1P62962 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfn1P62962 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfn1P62962 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfn1P62962 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfn1P62962 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pfn1P62962 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfn1P62962 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Pfn1P62962 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfn1P62962 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfn1P62962 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Pfn1P62962 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Pfn1P62962 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfn1P62962 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Pfn1P62962 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfn1P62962 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfn1P62962 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pfn1P62962 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfn1P62962 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfn1P62962 Gm12933-201ENSMUST00000120203 872 ntBASIC12.52□□□□□ -0.41
Pfn1P62962 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.52□□□□□ -0.41
Pfn1P62962 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pfn1P62962 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.52□□□□□ -0.41
Pfn1P62962 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.52□□□□□ -0.41
Pfn1P62962 Gm4974-201ENSMUST00000209974 875 ntBASIC12.52□□□□□ -0.41
Pfn1P62962 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfn1P62962 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfn1P62962 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Pfn1P62962 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfn1P62962 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
Pfn1P62962 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Pfn1P62962 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.52□□□□□ -0.41
Pfn1P62962 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pfn1P62962 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.52□□□□□ -0.41
Pfn1P62962 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.52□□□□□ -0.41
Pfn1P62962 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.51□□□□□ -0.41
Pfn1P62962 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pfn1P62962 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pfn1P62962 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Pfn1P62962 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.51□□□□□ -0.41
Pfn1P62962 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.51□□□□□ -0.41
Pfn1P62962 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Pfn1P62962 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfn1P62962 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms