Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl39P62892 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl39P62892 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC11.53□□□□□ -0.56
Rpl39P62892 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Rpl39P62892 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl39P62892 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rpl39P62892 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rpl39P62892 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
Rpl39P62892 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Rpl39P62892 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rpl39P62892 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rpl39P62892 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rpl39P62892 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rpl39P62892 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rpl39P62892 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl39P62892 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.52□□□□□ -0.57
Rpl39P62892 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl39P62892 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl39P62892 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl39P62892 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC11.52□□□□□ -0.57
Rpl39P62892 Gm43183-201ENSMUST00000200632 547 ntBASIC11.52□□□□□ -0.57
Rpl39P62892 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rpl39P62892 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl39P62892 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rpl39P62892 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl39P62892 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl39P62892 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Rpl39P62892 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl39P62892 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl39P62892 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl39P62892 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl39P62892 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rpl39P62892 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rpl39P62892 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.51□□□□□ -0.57
Rpl39P62892 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.51□□□□□ -0.57
Rpl39P62892 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.51□□□□□ -0.57
Rpl39P62892 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Rpl39P62892 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Rpl39P62892 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.51□□□□□ -0.57
Rpl39P62892 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.51□□□□□ -0.57
Rpl39P62892 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC11.51□□□□□ -0.57
Rpl39P62892 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC11.51□□□□□ -0.57
Rpl39P62892 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rpl39P62892 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl39P62892 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl39P62892 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl39P62892 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl39P62892 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl39P62892 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.5□□□□□ -0.57
Rpl39P62892 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl39P62892 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl39P62892 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl39P62892 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl39P62892 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl39P62892 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Rpl39P62892 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl39P62892 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl39P62892 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl39P62892 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Rpl39P62892 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl39P62892 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl39P62892 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl39P62892 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl39P62892 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl39P62892 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl39P62892 Gm12933-201ENSMUST00000120203 872 ntBASIC11.5□□□□□ -0.57
Rpl39P62892 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms