Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm6P62313 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.12□□□□□ -0.15
Lsm6P62313 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm6P62313 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Lsm6P62313 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm6P62313 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm6P62313 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm6P62313 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm6P62313 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm6P62313 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm6P62313 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm6P62313 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Lsm6P62313 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm6P62313 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.12□□□□□ -0.15
Lsm6P62313 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.12□□□□□ -0.15
Lsm6P62313 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm6P62313 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm6P62313 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.12□□□□□ -0.15
Lsm6P62313 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
Lsm6P62313 Mir7071-201ENSMUST00000184847 69 ntBASIC14.12□□□□□ -0.15
Lsm6P62313 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm6P62313 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm6P62313 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm6P62313 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm6P62313 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm6P62313 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.12□□□□□ -0.15
Lsm6P62313 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm6P62313 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm6P62313 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.12□□□□□ -0.15
Lsm6P62313 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.12□□□□□ -0.15
Lsm6P62313 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm6P62313 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Lsm6P62313 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Lsm6P62313 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.12□□□□□ -0.15
Lsm6P62313 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm6P62313 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.12□□□□□ -0.15
Lsm6P62313 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Lsm6P62313 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm6P62313 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm6P62313 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Lsm6P62313 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm6P62313 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm6P62313 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Lsm6P62313 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm6P62313 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Lsm6P62313 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm6P62313 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm6P62313 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Lsm6P62313 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm6P62313 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Lsm6P62313 Gm45328-201ENSMUST00000210942 917 ntBASIC14.11□□□□□ -0.15
Lsm6P62313 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm6P62313 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm6P62313 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Lsm6P62313 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm6P62313 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.11□□□□□ -0.15
Lsm6P62313 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm6P62313 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm6P62313 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm6P62313 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.11□□□□□ -0.15
Lsm6P62313 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Lsm6P62313 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm6P62313 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm6P62313 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm6P62313 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm6P62313 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm6P62313 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Lsm6P62313 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm6P62313 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm6P62313 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm6P62313 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm6P62313 Gm13836-201ENSMUST00000121159 501 ntBASIC14.1□□□□□ -0.15
Lsm6P62313 Gm11950-201ENSMUST00000121615 838 ntBASIC14.1□□□□□ -0.15
Lsm6P62313 Gm6659-201ENSMUST00000174752 547 ntBASIC14.1□□□□□ -0.15
Lsm6P62313 Gm23634-201ENSMUST00000175071 91 ntBASIC14.1□□□□□ -0.15
Lsm6P62313 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm6P62313 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.1□□□□□ -0.15
Lsm6P62313 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.1□□□□□ -0.15
Lsm6P62313 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.1□□□□□ -0.15
Lsm6P62313 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.1□□□□□ -0.15
Lsm6P62313 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm6P62313 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Lsm6P62313 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm6P62313 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm6P62313 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Lsm6P62313 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm6P62313 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm6P62313 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm6P62313 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm6P62313 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.09□□□□□ -0.15
Lsm6P62313 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm6P62313 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Lsm6P62313 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm6P62313 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Lsm6P62313 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm6P62313 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm6P62313 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm6P62313 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.09□□□□□ -0.15
Lsm6P62313 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Lsm6P62313 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms