Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Lmo4P61969 Gm11594-201ENSMUST00000122313 162 ntBASIC12.98□□□□□ -0.33
Lmo4P61969 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.98□□□□□ -0.33
Lmo4P61969 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.98□□□□□ -0.33
Lmo4P61969 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.98□□□□□ -0.33
Lmo4P61969 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.98□□□□□ -0.33
Lmo4P61969 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lmo4P61969 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lmo4P61969 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Lmo4P61969 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lmo4P61969 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lmo4P61969 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lmo4P61969 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmo4P61969 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Lmo4P61969 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmo4P61969 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Lmo4P61969 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmo4P61969 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmo4P61969 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmo4P61969 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmo4P61969 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lmo4P61969 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Lmo4P61969 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmo4P61969 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.97□□□□□ -0.33
Lmo4P61969 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.97□□□□□ -0.33
Lmo4P61969 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.97□□□□□ -0.33
Lmo4P61969 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.97□□□□□ -0.33
Lmo4P61969 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Lmo4P61969 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.97□□□□□ -0.33
Lmo4P61969 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Lmo4P61969 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmo4P61969 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmo4P61969 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmo4P61969 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lmo4P61969 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmo4P61969 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Lmo4P61969 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmo4P61969 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmo4P61969 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lmo4P61969 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lmo4P61969 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.96□□□□□ -0.33
Lmo4P61969 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lmo4P61969 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmo4P61969 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lmo4P61969 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Lmo4P61969 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Lmo4P61969 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmo4P61969 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmo4P61969 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmo4P61969 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmo4P61969 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmo4P61969 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmo4P61969 Gm11764-201ENSMUST00000120221 623 ntBASIC12.96□□□□□ -0.33
Lmo4P61969 Gm12260-201ENSMUST00000122447 411 ntBASIC12.96□□□□□ -0.33
Lmo4P61969 Gm9727-201ENSMUST00000161387 555 ntBASIC12.96□□□□□ -0.33
Lmo4P61969 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmo4P61969 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmo4P61969 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmo4P61969 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmo4P61969 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmo4P61969 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmo4P61969 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lmo4P61969 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Lmo4P61969 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.96□□□□□ -0.33
Lmo4P61969 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Lmo4P61969 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lmo4P61969 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lmo4P61969 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Lmo4P61969 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Lmo4P61969 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lmo4P61969 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lmo4P61969 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Lmo4P61969 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lmo4P61969 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Lmo4P61969 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lmo4P61969 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lmo4P61969 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmo4P61969 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmo4P61969 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lmo4P61969 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lmo4P61969 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Lmo4P61969 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmo4P61969 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmo4P61969 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmo4P61969 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lmo4P61969 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmo4P61969 Gm8344-201ENSMUST00000119813 856 ntBASIC12.95□□□□□ -0.34
Lmo4P61969 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.95□□□□□ -0.34
Lmo4P61969 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Lmo4P61969 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.95□□□□□ -0.34
Lmo4P61969 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lmo4P61969 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.95□□□□□ -0.34
Lmo4P61969 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmo4P61969 Gm5682-201ENSMUST00000173402 505 ntBASIC12.95□□□□□ -0.34
Lmo4P61969 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmo4P61969 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.95□□□□□ -0.34
Lmo4P61969 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmo4P61969 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmo4P61969 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.95□□□□□ -0.34
Lmo4P61969 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms