Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Sec61a1P61620 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Sec61a1P61620 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sec61a1P61620 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sec61a1P61620 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sec61a1P61620 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sec61a1P61620 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sec61a1P61620 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sec61a1P61620 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sec61a1P61620 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sec61a1P61620 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Sec61a1P61620 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Sec61a1P61620 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sec61a1P61620 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sec61a1P61620 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sec61a1P61620 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sec61a1P61620 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sec61a1P61620 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.2□□□□□ -0.14
Sec61a1P61620 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sec61a1P61620 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sec61a1P61620 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sec61a1P61620 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sec61a1P61620 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sec61a1P61620 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sec61a1P61620 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sec61a1P61620 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Sec61a1P61620 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.2□□□□□ -0.14
Sec61a1P61620 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sec61a1P61620 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Sec61a1P61620 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Sec61a1P61620 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sec61a1P61620 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.19□□□□□ -0.14
Sec61a1P61620 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.19□□□□□ -0.14
Sec61a1P61620 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Sec61a1P61620 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Sec61a1P61620 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.19□□□□□ -0.14
Sec61a1P61620 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sec61a1P61620 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sec61a1P61620 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sec61a1P61620 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sec61a1P61620 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.18□□□□□ -0.14
Sec61a1P61620 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.18□□□□□ -0.14
Sec61a1P61620 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Sec61a1P61620 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.18□□□□□ -0.14
Sec61a1P61620 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.18□□□□□ -0.14
Sec61a1P61620 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Sec61a1P61620 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.18□□□□□ -0.14
Sec61a1P61620 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sec61a1P61620 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sec61a1P61620 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.18□□□□□ -0.14
Sec61a1P61620 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms