Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sssca1P56873 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sssca1P56873 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Sssca1P56873 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sssca1P56873 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.03□□□□□ -0.32
Sssca1P56873 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sssca1P56873 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Sssca1P56873 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Sssca1P56873 Gm13186-201ENSMUST00000118031 316 ntBASIC13.03□□□□□ -0.32
Sssca1P56873 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.03□□□□□ -0.32
Sssca1P56873 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sssca1P56873 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sssca1P56873 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sssca1P56873 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sssca1P56873 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sssca1P56873 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sssca1P56873 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sssca1P56873 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Sssca1P56873 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sssca1P56873 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Sssca1P56873 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sssca1P56873 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sssca1P56873 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sssca1P56873 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.02□□□□□ -0.32
Sssca1P56873 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Sssca1P56873 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sssca1P56873 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Sssca1P56873 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Sssca1P56873 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sssca1P56873 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Sssca1P56873 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sssca1P56873 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sssca1P56873 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sssca1P56873 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sssca1P56873 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Sssca1P56873 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.02□□□□□ -0.33
Sssca1P56873 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.02□□□□□ -0.33
Sssca1P56873 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.02□□□□□ -0.33
Sssca1P56873 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Sssca1P56873 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Sssca1P56873 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sssca1P56873 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sssca1P56873 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.02□□□□□ -0.33
Sssca1P56873 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sssca1P56873 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sssca1P56873 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sssca1P56873 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sssca1P56873 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sssca1P56873 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sssca1P56873 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sssca1P56873 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sssca1P56873 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sssca1P56873 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sssca1P56873 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.01□□□□□ -0.33
Sssca1P56873 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sssca1P56873 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sssca1P56873 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sssca1P56873 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sssca1P56873 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sssca1P56873 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sssca1P56873 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.01□□□□□ -0.33
Sssca1P56873 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sssca1P56873 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sssca1P56873 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sssca1P56873 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.01□□□□□ -0.33
Sssca1P56873 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sssca1P56873 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.01□□□□□ -0.33
Sssca1P56873 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.01□□□□□ -0.33
Sssca1P56873 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sssca1P56873 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sssca1P56873 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sssca1P56873 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sssca1P56873 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sssca1P56873 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sssca1P56873 Phf7-203ENSMUST00000226565 1971 ntBASIC13.01□□□□□ -0.33
Sssca1P56873 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sssca1P56873 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sssca1P56873 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sssca1P56873 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sssca1P56873 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sssca1P56873 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sssca1P56873 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sssca1P56873 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sssca1P56873 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sssca1P56873 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sssca1P56873 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Sssca1P56873 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sssca1P56873 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sssca1P56873 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sssca1P56873 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sssca1P56873 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13□□□□□ -0.33
Sssca1P56873 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sssca1P56873 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sssca1P56873 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sssca1P56873 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sssca1P56873 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sssca1P56873 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sssca1P56873 Sybu-209ENSMUST00000228639 4113 ntBASIC13□□□□□ -0.33
Sssca1P56873 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sssca1P56873 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms