Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab4aP56371 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rab4aP56371 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rab4aP56371 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab4aP56371 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rab4aP56371 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab4aP56371 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.75□□□□□ -0.37
Rab4aP56371 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab4aP56371 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rab4aP56371 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Rab4aP56371 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC12.75□□□□□ -0.37
Rab4aP56371 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab4aP56371 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rab4aP56371 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab4aP56371 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Rab4aP56371 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab4aP56371 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab4aP56371 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab4aP56371 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.75□□□□□ -0.37
Rab4aP56371 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.75□□□□□ -0.37
Rab4aP56371 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab4aP56371 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab4aP56371 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Rab4aP56371 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab4aP56371 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab4aP56371 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.75□□□□□ -0.37
Rab4aP56371 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Rab4aP56371 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rab4aP56371 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rab4aP56371 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab4aP56371 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab4aP56371 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab4aP56371 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab4aP56371 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab4aP56371 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rab4aP56371 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab4aP56371 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab4aP56371 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rab4aP56371 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC12.74□□□□□ -0.37
Rab4aP56371 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab4aP56371 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab4aP56371 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab4aP56371 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab4aP56371 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rab4aP56371 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rab4aP56371 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab4aP56371 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab4aP56371 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.74□□□□□ -0.37
Rab4aP56371 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab4aP56371 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rab4aP56371 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab4aP56371 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab4aP56371 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab4aP56371 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab4aP56371 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
Rab4aP56371 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab4aP56371 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rab4aP56371 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rab4aP56371 Mir8112-201ENSMUST00000184382 131 ntBASIC12.73□□□□□ -0.37
Rab4aP56371 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab4aP56371 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.73□□□□□ -0.37
Rab4aP56371 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rab4aP56371 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab4aP56371 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab4aP56371 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab4aP56371 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab4aP56371 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rab4aP56371 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.73□□□□□ -0.37
Rab4aP56371 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab4aP56371 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.73□□□□□ -0.37
Rab4aP56371 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab4aP56371 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab4aP56371 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab4aP56371 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab4aP56371 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Rab4aP56371 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab4aP56371 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab4aP56371 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab4aP56371 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rab4aP56371 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab4aP56371 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.72□□□□□ -0.37
Rab4aP56371 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab4aP56371 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rab4aP56371 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rab4aP56371 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab4aP56371 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab4aP56371 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab4aP56371 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab4aP56371 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC12.72□□□□□ -0.37
Rab4aP56371 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab4aP56371 Gm9988-201ENSMUST00000069786 435 ntBASIC12.72□□□□□ -0.37
Rab4aP56371 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab4aP56371 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab4aP56371 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
Rab4aP56371 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Rab4aP56371 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab4aP56371 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab4aP56371 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rab4aP56371 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rab4aP56371 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms