Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm27389-201ENSMUST00000183622 195 ntBASIC14.7□□□□□ -0.06
Cdh11P55288 Gm21362-201ENSMUST00000194272 928 ntBASIC14.7□□□□□ -0.06
Cdh11P55288 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh11P55288 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh11P55288 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh11P55288 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh11P55288 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh11P55288 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh11P55288 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Cdh11P55288 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh11P55288 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh11P55288 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Cdh11P55288 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Cdh11P55288 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh11P55288 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.69□□□□□ -0.06
Cdh11P55288 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh11P55288 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh11P55288 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh11P55288 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.69□□□□□ -0.06
Cdh11P55288 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh11P55288 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh11P55288 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh11P55288 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Cdh11P55288 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh11P55288 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh11P55288 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh11P55288 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cdh11P55288 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh11P55288 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh11P55288 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh11P55288 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Cdh11P55288 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Cdh11P55288 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.69□□□□□ -0.06
Cdh11P55288 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh11P55288 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh11P55288 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.69□□□□□ -0.06
Cdh11P55288 Gm17661-201ENSMUST00000170317 270 ntBASIC14.69□□□□□ -0.06
Cdh11P55288 Gm7370-201ENSMUST00000219471 767 ntBASIC14.69□□□□□ -0.06
Cdh11P55288 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh11P55288 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh11P55288 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Cdh11P55288 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.69□□□□□ -0.06
Cdh11P55288 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh11P55288 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh11P55288 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh11P55288 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cdh11P55288 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh11P55288 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh11P55288 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cdh11P55288 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.68□□□□□ -0.06
Cdh11P55288 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cdh11P55288 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh11P55288 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh11P55288 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cdh11P55288 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh11P55288 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh11P55288 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh11P55288 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh11P55288 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh11P55288 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh11P55288 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh11P55288 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cdh11P55288 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.68□□□□□ -0.06
Cdh11P55288 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh11P55288 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh11P55288 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh11P55288 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh11P55288 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh11P55288 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh11P55288 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh11P55288 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh11P55288 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Cdh11P55288 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh11P55288 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh11P55288 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh11P55288 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Cdh11P55288 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh11P55288 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh11P55288 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh11P55288 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh11P55288 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdh11P55288 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh11P55288 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh11P55288 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh11P55288 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh11P55288 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh11P55288 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh11P55288 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdh11P55288 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh11P55288 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh11P55288 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdh11P55288 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh11P55288 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
Cdh11P55288 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.67□□□□□ -0.06
Cdh11P55288 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh11P55288 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.67□□□□□ -0.06
Cdh11P55288 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh11P55288 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.67□□□□□ -0.06
Cdh11P55288 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh11P55288 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms