Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacnb3P54285 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacnb3P54285 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacnb3P54285 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacnb3P54285 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacnb3P54285 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacnb3P54285 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.72■□□□□ 0.59
Cacnb3P54285 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacnb3P54285 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacnb3P54285 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacnb3P54285 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacnb3P54285 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cacnb3P54285 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacnb3P54285 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacnb3P54285 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cacnb3P54285 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacnb3P54285 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cacnb3P54285 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cacnb3P54285 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Cacnb3P54285 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cacnb3P54285 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Cacnb3P54285 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacnb3P54285 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacnb3P54285 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacnb3P54285 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacnb3P54285 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cacnb3P54285 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.71■□□□□ 0.59
Cacnb3P54285 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.71■□□□□ 0.59
Cacnb3P54285 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.71■□□□□ 0.59
Cacnb3P54285 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacnb3P54285 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cacnb3P54285 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacnb3P54285 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacnb3P54285 Grk6-207ENSMUST00000225925 2769 ntBASIC18.71■□□□□ 0.59
Cacnb3P54285 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacnb3P54285 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacnb3P54285 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacnb3P54285 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacnb3P54285 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacnb3P54285 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacnb3P54285 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacnb3P54285 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cacnb3P54285 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Cacnb3P54285 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacnb3P54285 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.7■□□□□ 0.58
Cacnb3P54285 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Cacnb3P54285 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.7■□□□□ 0.58
Cacnb3P54285 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Cacnb3P54285 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Cacnb3P54285 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.7■□□□□ 0.58
Cacnb3P54285 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cacnb3P54285 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.7■□□□□ 0.58
Cacnb3P54285 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.7■□□□□ 0.58
Cacnb3P54285 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.7■□□□□ 0.58
Cacnb3P54285 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cacnb3P54285 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.7■□□□□ 0.58
Cacnb3P54285 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.7■□□□□ 0.58
Cacnb3P54285 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacnb3P54285 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacnb3P54285 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacnb3P54285 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cacnb3P54285 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cacnb3P54285 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacnb3P54285 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacnb3P54285 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacnb3P54285 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacnb3P54285 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cacnb3P54285 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cacnb3P54285 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.69■□□□□ 0.58
Cacnb3P54285 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacnb3P54285 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacnb3P54285 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cacnb3P54285 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacnb3P54285 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacnb3P54285 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.69■□□□□ 0.58
Cacnb3P54285 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.69■□□□□ 0.58
Cacnb3P54285 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Cacnb3P54285 Gm45167-201ENSMUST00000208007 322 ntBASIC18.69■□□□□ 0.58
Cacnb3P54285 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cacnb3P54285 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacnb3P54285 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacnb3P54285 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacnb3P54285 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacnb3P54285 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cacnb3P54285 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacnb3P54285 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacnb3P54285 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacnb3P54285 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacnb3P54285 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cacnb3P54285 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacnb3P54285 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacnb3P54285 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.68■□□□□ 0.58
Cacnb3P54285 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.68■□□□□ 0.58
Cacnb3P54285 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacnb3P54285 Mir3113-201ENSMUST00000175478 76 ntBASIC18.68■□□□□ 0.58
Cacnb3P54285 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacnb3P54285 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cacnb3P54285 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacnb3P54285 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cacnb3P54285 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms