Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sox1P53783 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sox1P53783 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox1P53783 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Sox1P53783 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.39■□□□□ 0.21
Sox1P53783 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.39■□□□□ 0.21
Sox1P53783 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Sox1P53783 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.39■□□□□ 0.21
Sox1P53783 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox1P53783 Gm27618-201ENSMUST00000183671 60 ntBASIC16.39■□□□□ 0.21
Sox1P53783 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.39■□□□□ 0.21
Sox1P53783 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sox1P53783 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox1P53783 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.39■□□□□ 0.21
Sox1P53783 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sox1P53783 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Sox1P53783 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox1P53783 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sox1P53783 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Sox1P53783 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sox1P53783 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox1P53783 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox1P53783 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox1P53783 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Sox1P53783 Gm12490-201ENSMUST00000120255 560 ntBASIC16.38■□□□□ 0.21
Sox1P53783 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.38■□□□□ 0.21
Sox1P53783 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.38■□□□□ 0.21
Sox1P53783 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox1P53783 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Sox1P53783 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox1P53783 Grk6-206ENSMUST00000224995 2971 ntBASIC16.38■□□□□ 0.21
Sox1P53783 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox1P53783 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox1P53783 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sox1P53783 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Sox1P53783 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox1P53783 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox1P53783 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sox1P53783 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sox1P53783 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox1P53783 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox1P53783 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.38■□□□□ 0.21
Sox1P53783 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox1P53783 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox1P53783 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Sox1P53783 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox1P53783 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox1P53783 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.37■□□□□ 0.21
Sox1P53783 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox1P53783 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.37■□□□□ 0.21
Sox1P53783 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.37■□□□□ 0.21
Sox1P53783 Gm10253-201ENSMUST00000194270 940 ntBASIC16.37■□□□□ 0.21
Sox1P53783 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.37■□□□□ 0.21
Sox1P53783 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox1P53783 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Sox1P53783 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox1P53783 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox1P53783 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox1P53783 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox1P53783 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox1P53783 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox1P53783 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox1P53783 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Sox1P53783 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Sox1P53783 Gm22065-201ENSMUST00000103753 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm22066-201ENSMUST00000103761 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm24932-201ENSMUST00000103763 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm24115-201ENSMUST00000103799 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm22190-201ENSMUST00000103827 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm22191-201ENSMUST00000103831 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm24721-201ENSMUST00000103849 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm28018-201ENSMUST00000103869 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm26399-201ENSMUST00000103937 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Sox1P53783 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sox1P53783 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.36■□□□□ 0.21
Sox1P53783 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sox1P53783 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.36■□□□□ 0.21
Sox1P53783 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Sox1P53783 Gm25349-201ENSMUST00000177728 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm23616-201ENSMUST00000177797 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm25871-201ENSMUST00000177816 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm24752-201ENSMUST00000178240 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm24496-201ENSMUST00000178287 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm25649-201ENSMUST00000178476 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm25548-201ENSMUST00000178681 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm23147-201ENSMUST00000178841 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Sox1P53783 Gm26095-201ENSMUST00000179270 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm22171-201ENSMUST00000179283 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm23936-201ENSMUST00000179354 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm22619-201ENSMUST00000179516 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm25255-201ENSMUST00000179579 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm24755-201ENSMUST00000179691 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm26506-201ENSMUST00000179692 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm25086-201ENSMUST00000179931 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm23243-201ENSMUST00000180047 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm24659-201ENSMUST00000180212 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm24169-201ENSMUST00000180244 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm23689-201ENSMUST00000180354 110 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms