Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdx1P52946 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.92■□□□□ 0.14
Pdx1P52946 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdx1P52946 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdx1P52946 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdx1P52946 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdx1P52946 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pdx1P52946 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdx1P52946 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdx1P52946 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdx1P52946 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdx1P52946 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdx1P52946 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdx1P52946 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdx1P52946 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.91■□□□□ 0.14
Pdx1P52946 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdx1P52946 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdx1P52946 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.91■□□□□ 0.14
Pdx1P52946 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.91■□□□□ 0.14
Pdx1P52946 Gm13312-201ENSMUST00000119631 718 ntBASIC15.91■□□□□ 0.14
Pdx1P52946 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdx1P52946 Ank2-226ENSMUST00000189368 339 ntBASIC15.91■□□□□ 0.14
Pdx1P52946 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.91■□□□□ 0.14
Pdx1P52946 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pdx1P52946 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.91■□□□□ 0.14
Pdx1P52946 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdx1P52946 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pdx1P52946 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdx1P52946 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdx1P52946 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Pdx1P52946 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Pdx1P52946 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdx1P52946 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdx1P52946 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdx1P52946 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Pdx1P52946 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pdx1P52946 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdx1P52946 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pdx1P52946 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdx1P52946 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.9■□□□□ 0.14
Pdx1P52946 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Pdx1P52946 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.9■□□□□ 0.14
Pdx1P52946 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.9■□□□□ 0.14
Pdx1P52946 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdx1P52946 Mir3081-201ENSMUST00000175305 84 ntBASIC15.9■□□□□ 0.14
Pdx1P52946 Gm27357-201ENSMUST00000183754 135 ntBASIC15.9■□□□□ 0.14
Pdx1P52946 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.9■□□□□ 0.14
Pdx1P52946 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Pdx1P52946 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdx1P52946 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pdx1P52946 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdx1P52946 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdx1P52946 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdx1P52946 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdx1P52946 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.9■□□□□ 0.14
Pdx1P52946 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pdx1P52946 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdx1P52946 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Pdx1P52946 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdx1P52946 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdx1P52946 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.89■□□□□ 0.13
Pdx1P52946 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdx1P52946 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.89■□□□□ 0.13
Pdx1P52946 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pdx1P52946 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdx1P52946 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdx1P52946 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pdx1P52946 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdx1P52946 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pdx1P52946 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pdx1P52946 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdx1P52946 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdx1P52946 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pdx1P52946 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pdx1P52946 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdx1P52946 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pdx1P52946 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Pdx1P52946 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdx1P52946 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdx1P52946 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pdx1P52946 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pdx1P52946 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdx1P52946 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Pdx1P52946 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdx1P52946 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdx1P52946 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdx1P52946 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdx1P52946 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdx1P52946 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Pdx1P52946 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pdx1P52946 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdx1P52946 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdx1P52946 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pdx1P52946 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdx1P52946 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdx1P52946 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdx1P52946 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdx1P52946 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdx1P52946 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdx1P52946 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms