Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Brca1P48754 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Brca1P48754 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Brca1P48754 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Brca1P48754 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Brca1P48754 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Brca1P48754 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Brca1P48754 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.95■□□□□ 0.46
Brca1P48754 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.95■□□□□ 0.46
Brca1P48754 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Brca1P48754 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.95■□□□□ 0.46
Brca1P48754 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.95■□□□□ 0.46
Brca1P48754 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Brca1P48754 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Brca1P48754 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Brca1P48754 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Brca1P48754 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Brca1P48754 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Brca1P48754 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Brca1P48754 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Brca1P48754 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.94■□□□□ 0.46
Brca1P48754 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Brca1P48754 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Brca1P48754 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.94■□□□□ 0.46
Brca1P48754 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Brca1P48754 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Brca1P48754 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Brca1P48754 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Brca1P48754 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Brca1P48754 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Brca1P48754 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Brca1P48754 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Brca1P48754 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Brca1P48754 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Brca1P48754 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Brca1P48754 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Brca1P48754 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Brca1P48754 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Brca1P48754 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Brca1P48754 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Brca1P48754 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Brca1P48754 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.93■□□□□ 0.46
Brca1P48754 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Brca1P48754 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Brca1P48754 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Brca1P48754 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Brca1P48754 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Brca1P48754 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.93■□□□□ 0.46
Brca1P48754 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.93■□□□□ 0.46
Brca1P48754 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Brca1P48754 Gm27301-201ENSMUST00000184012 127 ntBASIC17.93■□□□□ 0.46
Brca1P48754 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Brca1P48754 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Brca1P48754 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Brca1P48754 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Brca1P48754 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Brca1P48754 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Brca1P48754 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Brca1P48754 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Brca1P48754 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.92■□□□□ 0.46
Brca1P48754 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Brca1P48754 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Brca1P48754 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Brca1P48754 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Brca1P48754 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Brca1P48754 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Brca1P48754 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.92■□□□□ 0.46
Brca1P48754 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Brca1P48754 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.92■□□□□ 0.46
Brca1P48754 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Brca1P48754 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Brca1P48754 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Brca1P48754 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Brca1P48754 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Brca1P48754 Mir449b-201ENSMUST00000104833 80 ntBASIC17.91■□□□□ 0.46
Brca1P48754 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Brca1P48754 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.91■□□□□ 0.46
Brca1P48754 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Brca1P48754 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.91■□□□□ 0.46
Brca1P48754 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Brca1P48754 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Brca1P48754 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Brca1P48754 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.91■□□□□ 0.46
Brca1P48754 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.91■□□□□ 0.46
Brca1P48754 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Brca1P48754 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Brca1P48754 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Brca1P48754 Gm22065-201ENSMUST00000103753 110 ntBASIC17.91■□□□□ 0.46
Brca1P48754 Gm22066-201ENSMUST00000103761 110 ntBASIC17.91■□□□□ 0.46
Brca1P48754 Gm24932-201ENSMUST00000103763 110 ntBASIC17.91■□□□□ 0.46
Brca1P48754 Gm24115-201ENSMUST00000103799 110 ntBASIC17.91■□□□□ 0.46
Brca1P48754 Gm22190-201ENSMUST00000103827 110 ntBASIC17.91■□□□□ 0.46
Brca1P48754 Gm22191-201ENSMUST00000103831 110 ntBASIC17.91■□□□□ 0.46
Brca1P48754 Gm24721-201ENSMUST00000103849 110 ntBASIC17.91■□□□□ 0.46
Brca1P48754 Gm28018-201ENSMUST00000103869 110 ntBASIC17.91■□□□□ 0.46
Brca1P48754 Gm26399-201ENSMUST00000103937 110 ntBASIC17.91■□□□□ 0.46
Brca1P48754 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.91■□□□□ 0.46
Brca1P48754 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Brca1P48754 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.91■□□□□ 0.46
Brca1P48754 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms