Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox18P43680 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox18P43680 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Sox18P43680 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox18P43680 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox18P43680 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Sox18P43680 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox18P43680 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.38■□□□□ 0.05
Sox18P43680 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox18P43680 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox18P43680 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox18P43680 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox18P43680 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.38■□□□□ 0.05
Sox18P43680 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Sox18P43680 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.38■□□□□ 0.05
Sox18P43680 AA543401-201ENSMUST00000164248 1269 ntBASIC15.38■□□□□ 0.05
Sox18P43680 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC15.38■□□□□ 0.05
Sox18P43680 Gm21156-201ENSMUST00000189693 869 ntBASIC15.38■□□□□ 0.05
Sox18P43680 Gm37102-201ENSMUST00000195740 1105 ntBASIC15.38■□□□□ 0.05
Sox18P43680 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Sox18P43680 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox18P43680 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.38■□□□□ 0.05
Sox18P43680 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox18P43680 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.38■□□□□ 0.05
Sox18P43680 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Sox18P43680 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox18P43680 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox18P43680 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox18P43680 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.38■□□□□ 0.05
Sox18P43680 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Sox18P43680 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sox18P43680 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.38■□□□□ 0.05
Sox18P43680 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox18P43680 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sox18P43680 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox18P43680 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox18P43680 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox18P43680 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox18P43680 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Sox18P43680 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.38■□□□□ 0.05
Sox18P43680 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sox18P43680 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Sox18P43680 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox18P43680 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.37■□□□□ 0.05
Sox18P43680 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox18P43680 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox18P43680 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox18P43680 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox18P43680 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox18P43680 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox18P43680 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox18P43680 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox18P43680 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.37■□□□□ 0.05
Sox18P43680 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox18P43680 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox18P43680 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox18P43680 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox18P43680 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox18P43680 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox18P43680 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sox18P43680 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox18P43680 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox18P43680 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox18P43680 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox18P43680 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sox18P43680 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox18P43680 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox18P43680 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox18P43680 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox18P43680 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox18P43680 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sox18P43680 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.36■□□□□ 0.05
Sox18P43680 Gm13616-201ENSMUST00000120600 222 ntBASIC15.36■□□□□ 0.05
Sox18P43680 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox18P43680 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.36■□□□□ 0.05
Sox18P43680 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.36■□□□□ 0.05
Sox18P43680 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox18P43680 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox18P43680 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox18P43680 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox18P43680 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.36■□□□□ 0.05
Sox18P43680 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox18P43680 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox18P43680 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox18P43680 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox18P43680 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox18P43680 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox18P43680 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Sox18P43680 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Sox18P43680 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sox18P43680 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox18P43680 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox18P43680 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox18P43680 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox18P43680 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox18P43680 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox18P43680 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.35■□□□□ 0.05
Sox18P43680 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sox18P43680 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Sox18P43680 Gm17271-201ENSMUST00000165535 355 ntBASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms