Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.08■□□□□ 0.33
HttP42859 Gm27989-201ENSMUST00000184721 107 ntBASIC17.08■□□□□ 0.33
HttP42859 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.08■□□□□ 0.33
HttP42859 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HttP42859 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
HttP42859 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HttP42859 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HttP42859 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
HttP42859 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HttP42859 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HttP42859 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.08■□□□□ 0.32
HttP42859 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HttP42859 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HttP42859 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HttP42859 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.08■□□□□ 0.32
HttP42859 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HttP42859 Gm29541-201ENSMUST00000191351 678 ntBASIC17.07■□□□□ 0.32
HttP42859 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HttP42859 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HttP42859 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HttP42859 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC17.07■□□□□ 0.32
HttP42859 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HttP42859 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HttP42859 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.07■□□□□ 0.32
HttP42859 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC17.07■□□□□ 0.32
HttP42859 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.07■□□□□ 0.32
HttP42859 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HttP42859 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HttP42859 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HttP42859 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HttP42859 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HttP42859 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HttP42859 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HttP42859 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HttP42859 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
HttP42859 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.06■□□□□ 0.32
HttP42859 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HttP42859 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HttP42859 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HttP42859 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HttP42859 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.06■□□□□ 0.32
HttP42859 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HttP42859 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HttP42859 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.06■□□□□ 0.32
HttP42859 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.06■□□□□ 0.32
HttP42859 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.06■□□□□ 0.32
HttP42859 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HttP42859 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.06■□□□□ 0.32
HttP42859 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HttP42859 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.06■□□□□ 0.32
HttP42859 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC17.06■□□□□ 0.32
HttP42859 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HttP42859 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.06■□□□□ 0.32
HttP42859 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.06■□□□□ 0.32
HttP42859 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.06■□□□□ 0.32
HttP42859 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.06■□□□□ 0.32
HttP42859 Gm4518-201ENSMUST00000182638 718 ntBASIC17.06■□□□□ 0.32
HttP42859 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.06■□□□□ 0.32
HttP42859 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.06■□□□□ 0.32
HttP42859 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.06■□□□□ 0.32
HttP42859 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HttP42859 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HttP42859 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HttP42859 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.06■□□□□ 0.32
HttP42859 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.06■□□□□ 0.32
HttP42859 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HttP42859 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
HttP42859 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HttP42859 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HttP42859 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HttP42859 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HttP42859 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.05■□□□□ 0.32
HttP42859 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.05■□□□□ 0.32
HttP42859 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.05■□□□□ 0.32
HttP42859 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HttP42859 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HttP42859 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HttP42859 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HttP42859 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HttP42859 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HttP42859 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HttP42859 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HttP42859 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HttP42859 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HttP42859 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC17.05■□□□□ 0.32
HttP42859 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HttP42859 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.04■□□□□ 0.32
HttP42859 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HttP42859 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.04■□□□□ 0.32
HttP42859 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HttP42859 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.04■□□□□ 0.32
HttP42859 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HttP42859 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HttP42859 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HttP42859 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HttP42859 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HttP42859 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC17.04■□□□□ 0.32
HttP42859 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.04■□□□□ 0.32
HttP42859 Gm18057-201ENSMUST00000208220 503 ntBASIC17.04■□□□□ 0.32
HttP42859 AC154239.3-201ENSMUST00000226933 674 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms