Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk2P38575 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Upk2P38575 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk2P38575 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk2P38575 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Upk2P38575 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Upk2P38575 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Upk2P38575 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.13□□□□□ -0.15
Upk2P38575 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Upk2P38575 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk2P38575 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk2P38575 AA414768-201ENSMUST00000121924 1257 ntBASIC14.13□□□□□ -0.15
Upk2P38575 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Upk2P38575 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.13□□□□□ -0.15
Upk2P38575 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.13□□□□□ -0.15
Upk2P38575 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.13□□□□□ -0.15
Upk2P38575 Gm29518-201ENSMUST00000190858 372 ntBASIC14.13□□□□□ -0.15
Upk2P38575 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Upk2P38575 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Upk2P38575 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk2P38575 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk2P38575 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Upk2P38575 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk2P38575 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk2P38575 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk2P38575 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk2P38575 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Upk2P38575 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk2P38575 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Upk2P38575 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Upk2P38575 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk2P38575 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk2P38575 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Upk2P38575 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Upk2P38575 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Upk2P38575 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Upk2P38575 Gm17808-201ENSMUST00000200859 894 ntBASIC14.12□□□□□ -0.15
Upk2P38575 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Upk2P38575 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.12□□□□□ -0.15
Upk2P38575 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk2P38575 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk2P38575 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk2P38575 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.12□□□□□ -0.15
Upk2P38575 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk2P38575 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.12□□□□□ -0.15
Upk2P38575 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Upk2P38575 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk2P38575 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk2P38575 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk2P38575 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Upk2P38575 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.12□□□□□ -0.15
Upk2P38575 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Upk2P38575 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk2P38575 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk2P38575 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk2P38575 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Upk2P38575 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk2P38575 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk2P38575 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk2P38575 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk2P38575 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk2P38575 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Upk2P38575 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Upk2P38575 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk2P38575 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk2P38575 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk2P38575 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Upk2P38575 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.11□□□□□ -0.15
Upk2P38575 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk2P38575 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk2P38575 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.11□□□□□ -0.15
Upk2P38575 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk2P38575 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk2P38575 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Upk2P38575 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk2P38575 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk2P38575 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk2P38575 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Upk2P38575 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk2P38575 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk2P38575 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk2P38575 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk2P38575 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk2P38575 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Upk2P38575 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Upk2P38575 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk2P38575 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk2P38575 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Upk2P38575 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.1□□□□□ -0.15
Upk2P38575 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk2P38575 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk2P38575 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk2P38575 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk2P38575 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk2P38575 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Upk2P38575 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Upk2P38575 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Upk2P38575 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk2P38575 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Upk2P38575 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms