Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LdlrP35951 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LdlrP35951 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LdlrP35951 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LdlrP35951 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LdlrP35951 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LdlrP35951 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
LdlrP35951 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LdlrP35951 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LdlrP35951 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
LdlrP35951 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LdlrP35951 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LdlrP35951 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.02■□□□□ 0.16
LdlrP35951 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
LdlrP35951 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
LdlrP35951 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LdlrP35951 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LdlrP35951 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.02■□□□□ 0.16
LdlrP35951 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.02■□□□□ 0.16
LdlrP35951 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LdlrP35951 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LdlrP35951 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LdlrP35951 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LdlrP35951 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LdlrP35951 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LdlrP35951 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LdlrP35951 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LdlrP35951 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LdlrP35951 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.01■□□□□ 0.15
LdlrP35951 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LdlrP35951 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LdlrP35951 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LdlrP35951 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LdlrP35951 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LdlrP35951 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LdlrP35951 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.01■□□□□ 0.15
LdlrP35951 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.01■□□□□ 0.15
LdlrP35951 Gm7284-201ENSMUST00000131667 944 ntBASIC16.01■□□□□ 0.15
LdlrP35951 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.01■□□□□ 0.15
LdlrP35951 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LdlrP35951 Gm17971-201ENSMUST00000190239 806 ntBASIC16.01■□□□□ 0.15
LdlrP35951 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LdlrP35951 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LdlrP35951 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LdlrP35951 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.01■□□□□ 0.15
LdlrP35951 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LdlrP35951 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LdlrP35951 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.01■□□□□ 0.15
LdlrP35951 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LdlrP35951 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LdlrP35951 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
LdlrP35951 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LdlrP35951 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LdlrP35951 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LdlrP35951 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LdlrP35951 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.01■□□□□ 0.15
LdlrP35951 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LdlrP35951 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LdlrP35951 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LdlrP35951 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16■□□□□ 0.15
LdlrP35951 Phf7-203ENSMUST00000226565 1971 ntBASIC16■□□□□ 0.15
LdlrP35951 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16■□□□□ 0.15
LdlrP35951 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LdlrP35951 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16■□□□□ 0.15
LdlrP35951 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LdlrP35951 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LdlrP35951 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LdlrP35951 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16■□□□□ 0.15
LdlrP35951 Gm16061-201ENSMUST00000122167 857 ntBASIC16■□□□□ 0.15
LdlrP35951 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16■□□□□ 0.15
LdlrP35951 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16■□□□□ 0.15
LdlrP35951 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LdlrP35951 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16■□□□□ 0.15
LdlrP35951 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16■□□□□ 0.15
LdlrP35951 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
LdlrP35951 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LdlrP35951 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LdlrP35951 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16■□□□□ 0.15
LdlrP35951 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LdlrP35951 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LdlrP35951 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
LdlrP35951 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LdlrP35951 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LdlrP35951 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LdlrP35951 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LdlrP35951 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LdlrP35951 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LdlrP35951 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LdlrP35951 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LdlrP35951 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LdlrP35951 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
LdlrP35951 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LdlrP35951 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LdlrP35951 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
LdlrP35951 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.99■□□□□ 0.15
LdlrP35951 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
LdlrP35951 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LdlrP35951 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.99■□□□□ 0.15
LdlrP35951 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LdlrP35951 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms