Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Thbs1P35441 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Thbs1P35441 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Thbs1P35441 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Thbs1P35441 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thbs1P35441 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thbs1P35441 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thbs1P35441 Gm10819-201ENSMUST00000099988 561 ntBASIC14.88□□□□□ -0.03
Thbs1P35441 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.88□□□□□ -0.03
Thbs1P35441 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Thbs1P35441 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Thbs1P35441 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Thbs1P35441 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thbs1P35441 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.88□□□□□ -0.03
Thbs1P35441 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thbs1P35441 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thbs1P35441 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thbs1P35441 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thbs1P35441 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Thbs1P35441 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thbs1P35441 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.87□□□□□ -0.03
Thbs1P35441 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Thbs1P35441 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.87□□□□□ -0.03
Thbs1P35441 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Thbs1P35441 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.87□□□□□ -0.03
Thbs1P35441 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Thbs1P35441 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Thbs1P35441 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Thbs1P35441 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thbs1P35441 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.87□□□□□ -0.03
Thbs1P35441 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thbs1P35441 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.86□□□□□ -0.03
Thbs1P35441 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thbs1P35441 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Thbs1P35441 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thbs1P35441 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.86□□□□□ -0.03
Thbs1P35441 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thbs1P35441 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thbs1P35441 Mir770-201ENSMUST00000103252 94 ntBASIC14.86□□□□□ -0.03
Thbs1P35441 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Thbs1P35441 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC14.86□□□□□ -0.03
Thbs1P35441 Gm6345-202ENSMUST00000180900 204 ntBASIC14.86□□□□□ -0.03
Thbs1P35441 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.86□□□□□ -0.03
Thbs1P35441 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.86□□□□□ -0.03
Thbs1P35441 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Thbs1P35441 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Thbs1P35441 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Thbs1P35441 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thbs1P35441 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thbs1P35441 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thbs1P35441 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.86□□□□□ -0.03
Thbs1P35441 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thbs1P35441 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Thbs1P35441 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thbs1P35441 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thbs1P35441 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thbs1P35441 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thbs1P35441 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Thbs1P35441 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thbs1P35441 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thbs1P35441 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Thbs1P35441 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thbs1P35441 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Thbs1P35441 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thbs1P35441 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.85□□□□□ -0.03
Thbs1P35441 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thbs1P35441 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thbs1P35441 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Thbs1P35441 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thbs1P35441 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thbs1P35441 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Thbs1P35441 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thbs1P35441 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thbs1P35441 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thbs1P35441 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Thbs1P35441 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thbs1P35441 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms