Protein–RNA interactions for Protein: P34928

Apoc1, Apolipoprotein C-I, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoc1P34928 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.03□□□□□ -0.16
Apoc1P34928 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.03□□□□□ -0.16
Apoc1P34928 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Apoc1P34928 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Apoc1P34928 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Apoc1P34928 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Apoc1P34928 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Apoc1P34928 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Apoc1P34928 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Apoc1P34928 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Apoc1P34928 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Apoc1P34928 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Apoc1P34928 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Apoc1P34928 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Apoc1P34928 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Apoc1P34928 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Apoc1P34928 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Apoc1P34928 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Apoc1P34928 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Apoc1P34928 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Apoc1P34928 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Apoc1P34928 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.02□□□□□ -0.16
Apoc1P34928 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Apoc1P34928 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Apoc1P34928 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Apoc1P34928 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Apoc1P34928 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Apoc1P34928 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Apoc1P34928 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.02□□□□□ -0.17
Apoc1P34928 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Apoc1P34928 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Apoc1P34928 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.02□□□□□ -0.17
Apoc1P34928 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Apoc1P34928 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.02□□□□□ -0.17
Apoc1P34928 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Apoc1P34928 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.02□□□□□ -0.17
Apoc1P34928 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Apoc1P34928 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Apoc1P34928 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Apoc1P34928 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Apoc1P34928 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Apoc1P34928 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Apoc1P34928 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Apoc1P34928 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Apoc1P34928 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Apoc1P34928 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoc1P34928 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoc1P34928 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.01□□□□□ -0.17
Apoc1P34928 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoc1P34928 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoc1P34928 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoc1P34928 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoc1P34928 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoc1P34928 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoc1P34928 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Apoc1P34928 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoc1P34928 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Apoc1P34928 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Apoc1P34928 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.01□□□□□ -0.17
Apoc1P34928 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.01□□□□□ -0.17
Apoc1P34928 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Apoc1P34928 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoc1P34928 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Apoc1P34928 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoc1P34928 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.01□□□□□ -0.17
Apoc1P34928 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.01□□□□□ -0.17
Apoc1P34928 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Apoc1P34928 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoc1P34928 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoc1P34928 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoc1P34928 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Apoc1P34928 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoc1P34928 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14□□□□□ -0.17
Apoc1P34928 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Apoc1P34928 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Apoc1P34928 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Apoc1P34928 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14□□□□□ -0.17
Apoc1P34928 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Apoc1P34928 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Apoc1P34928 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Apoc1P34928 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Apoc1P34928 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14□□□□□ -0.17
Apoc1P34928 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14□□□□□ -0.17
Apoc1P34928 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14□□□□□ -0.17
Apoc1P34928 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
Apoc1P34928 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14□□□□□ -0.17
Apoc1P34928 Gm7370-201ENSMUST00000219471 767 ntBASIC14□□□□□ -0.17
Apoc1P34928 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Apoc1P34928 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Apoc1P34928 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Apoc1P34928 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14□□□□□ -0.17
Apoc1P34928 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Apoc1P34928 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14□□□□□ -0.17
Apoc1P34928 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Apoc1P34928 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14□□□□□ -0.17
Apoc1P34928 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Apoc1P34928 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Apoc1P34928 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14□□□□□ -0.17
Apoc1P34928 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Apoc1P34928 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms