Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cd28P31041 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cd28P31041 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cd28P31041 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cd28P31041 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cd28P31041 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cd28P31041 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cd28P31041 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cd28P31041 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cd28P31041 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Cd28P31041 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Cd28P31041 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.23□□□□□ -0.13
Cd28P31041 Il3ra-202ENSMUST00000223589 738 ntBASIC14.23□□□□□ -0.13
Cd28P31041 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cd28P31041 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Cd28P31041 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cd28P31041 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cd28P31041 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cd28P31041 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cd28P31041 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cd28P31041 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cd28P31041 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cd28P31041 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.23□□□□□ -0.13
Cd28P31041 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.22□□□□□ -0.13
Cd28P31041 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cd28P31041 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd28P31041 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Cd28P31041 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd28P31041 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cd28P31041 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cd28P31041 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cd28P31041 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd28P31041 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd28P31041 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd28P31041 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.22□□□□□ -0.13
Cd28P31041 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd28P31041 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd28P31041 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd28P31041 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cd28P31041 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cd28P31041 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cd28P31041 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.22□□□□□ -0.13
Cd28P31041 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd28P31041 Gm10602-201ENSMUST00000098239 609 ntBASIC14.22□□□□□ -0.13
Cd28P31041 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd28P31041 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd28P31041 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd28P31041 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd28P31041 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd28P31041 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd28P31041 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cd28P31041 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd28P31041 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd28P31041 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd28P31041 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd28P31041 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd28P31041 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cd28P31041 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd28P31041 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd28P31041 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd28P31041 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cd28P31041 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd28P31041 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd28P31041 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cd28P31041 Asic1-205ENSMUST00000228185 1818 ntBASIC14.21□□□□□ -0.13
Cd28P31041 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd28P31041 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd28P31041 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cd28P31041 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd28P31041 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd28P31041 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd28P31041 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cd28P31041 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cd28P31041 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Cd28P31041 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd28P31041 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
Cd28P31041 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Cd28P31041 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd28P31041 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd28P31041 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cd28P31041 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cd28P31041 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Cd28P31041 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cd28P31041 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cd28P31041 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cd28P31041 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.21□□□□□ -0.14
Cd28P31041 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cd28P31041 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cd28P31041 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd28P31041 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cd28P31041 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd28P31041 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cd28P31041 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Cd28P31041 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Cd28P31041 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd28P31041 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cd28P31041 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd28P31041 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd28P31041 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.2□□□□□ -0.14
Cd28P31041 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms