Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nedd8P29595 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nedd8P29595 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nedd8P29595 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nedd8P29595 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nedd8P29595 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nedd8P29595 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nedd8P29595 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nedd8P29595 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nedd8P29595 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nedd8P29595 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nedd8P29595 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
Nedd8P29595 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nedd8P29595 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nedd8P29595 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nedd8P29595 Mir6349-201ENSMUST00000184059 97 ntBASIC14.96□□□□□ -0.01
Nedd8P29595 Gm44549-201ENSMUST00000208351 577 ntBASIC14.96□□□□□ -0.01
Nedd8P29595 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Nedd8P29595 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nedd8P29595 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nedd8P29595 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nedd8P29595 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nedd8P29595 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nedd8P29595 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.96□□□□□ -0.01
Nedd8P29595 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nedd8P29595 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nedd8P29595 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.96□□□□□ -0.02
Nedd8P29595 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.96□□□□□ -0.02
Nedd8P29595 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Nedd8P29595 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nedd8P29595 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nedd8P29595 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nedd8P29595 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nedd8P29595 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Nedd8P29595 Gm11927-201ENSMUST00000118472 759 ntBASIC14.95□□□□□ -0.02
Nedd8P29595 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Nedd8P29595 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nedd8P29595 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nedd8P29595 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nedd8P29595 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nedd8P29595 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nedd8P29595 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nedd8P29595 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nedd8P29595 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nedd8P29595 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nedd8P29595 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nedd8P29595 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nedd8P29595 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Nedd8P29595 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nedd8P29595 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.94□□□□□ -0.02
Nedd8P29595 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nedd8P29595 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.94□□□□□ -0.02
Nedd8P29595 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.94□□□□□ -0.02
Nedd8P29595 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.94□□□□□ -0.02
Nedd8P29595 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.94□□□□□ -0.02
Nedd8P29595 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.94□□□□□ -0.02
Nedd8P29595 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Nedd8P29595 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Nedd8P29595 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.94□□□□□ -0.02
Nedd8P29595 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.94□□□□□ -0.02
Nedd8P29595 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nedd8P29595 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nedd8P29595 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nedd8P29595 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nedd8P29595 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Nedd8P29595 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Nedd8P29595 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nedd8P29595 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nedd8P29595 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nedd8P29595 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nedd8P29595 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nedd8P29595 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.93□□□□□ -0.02
Nedd8P29595 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nedd8P29595 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nedd8P29595 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms