Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vcam1P29533 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vcam1P29533 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Vcam1P29533 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vcam1P29533 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vcam1P29533 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vcam1P29533 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vcam1P29533 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vcam1P29533 Gm37153-201ENSMUST00000193637 231 ntBASIC18.44■□□□□ 0.54
Vcam1P29533 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.44■□□□□ 0.54
Vcam1P29533 Gm10175-201ENSMUST00000086013 645 ntBASIC18.44■□□□□ 0.54
Vcam1P29533 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vcam1P29533 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vcam1P29533 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vcam1P29533 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vcam1P29533 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vcam1P29533 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vcam1P29533 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vcam1P29533 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Vcam1P29533 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vcam1P29533 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vcam1P29533 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.43■□□□□ 0.54
Vcam1P29533 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vcam1P29533 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vcam1P29533 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Vcam1P29533 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.43■□□□□ 0.54
Vcam1P29533 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.43■□□□□ 0.54
Vcam1P29533 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Vcam1P29533 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vcam1P29533 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.43■□□□□ 0.54
Vcam1P29533 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vcam1P29533 Gm45167-201ENSMUST00000208007 322 ntBASIC18.43■□□□□ 0.54
Vcam1P29533 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.43■□□□□ 0.54
Vcam1P29533 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vcam1P29533 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vcam1P29533 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vcam1P29533 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vcam1P29533 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.43■□□□□ 0.54
Vcam1P29533 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vcam1P29533 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vcam1P29533 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vcam1P29533 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vcam1P29533 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vcam1P29533 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vcam1P29533 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vcam1P29533 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vcam1P29533 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.42■□□□□ 0.54
Vcam1P29533 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.42■□□□□ 0.54
Vcam1P29533 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.42■□□□□ 0.54
Vcam1P29533 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.42■□□□□ 0.54
Vcam1P29533 Gm4899-201ENSMUST00000178708 719 ntBASIC18.42■□□□□ 0.54
Vcam1P29533 Gm27702-201ENSMUST00000184512 56 ntBASIC18.42■□□□□ 0.54
Vcam1P29533 Gm2213-201ENSMUST00000197485 688 ntBASIC18.42■□□□□ 0.54
Vcam1P29533 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.42■□□□□ 0.54
Vcam1P29533 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.42■□□□□ 0.54
Vcam1P29533 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vcam1P29533 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vcam1P29533 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Vcam1P29533 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vcam1P29533 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vcam1P29533 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Vcam1P29533 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vcam1P29533 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vcam1P29533 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vcam1P29533 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vcam1P29533 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vcam1P29533 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vcam1P29533 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Vcam1P29533 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vcam1P29533 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vcam1P29533 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.41■□□□□ 0.54
Vcam1P29533 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vcam1P29533 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vcam1P29533 Gm25911-201ENSMUST00000157621 56 ntBASIC18.41■□□□□ 0.54
Vcam1P29533 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.41■□□□□ 0.54
Vcam1P29533 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.41■□□□□ 0.54
Vcam1P29533 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.41■□□□□ 0.54
Vcam1P29533 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.41■□□□□ 0.54
Vcam1P29533 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.41■□□□□ 0.54
Vcam1P29533 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vcam1P29533 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vcam1P29533 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vcam1P29533 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.41■□□□□ 0.54
Vcam1P29533 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vcam1P29533 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vcam1P29533 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vcam1P29533 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vcam1P29533 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vcam1P29533 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vcam1P29533 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vcam1P29533 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vcam1P29533 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vcam1P29533 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vcam1P29533 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vcam1P29533 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vcam1P29533 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vcam1P29533 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.4■□□□□ 0.54
Vcam1P29533 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.4■□□□□ 0.54
Vcam1P29533 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vcam1P29533 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms